Clusters of Characterized Proteins

Searching for 1.13.11.8 as complete word(s)

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Found 5 characterized proteins with matching descriptions. 5 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 289-302 amino acids (heteromeric)

G2IQQ3 protocatechuate 4,5-dioxygenase (subunit 1/2) (EC 1.13.11.8) from Sphingobium sp.
PFams: LigB
Heteromeric, 302 amino acids: PaperBLAST, CDD, Compare to cluster

P22636 protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) from Sphingobium sp. (strain NBRC 103272 / SYK-6)
PFams: LigB
Heteromeric, 302 amino acids: PaperBLAST, CDD, Compare to cluster

Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni
PFams: LigB
Heteromeric, 289 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 139-149 amino acids (heteromeric)

P22635 protocatechuate 4,5-dioxygenase alpha chain (EC 1.13.11.8) from Sphingobium sp. (strain NBRC 103272 / SYK-6)
G2IQQ4 protocatechuate 4,5-dioxygenase (subunit 2/2) (EC 1.13.11.8) from Sphingobium sp.
PFams: LigA
Heteromeric, 139 amino acids: PaperBLAST, CDD, Compare to cluster

Q8RNY0 protocatechuate 4,5-dioxygenase α subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni
Q8RNY0 protocatechuate 4,5-dioxygenase (EC 1.13.11.8) from Comamonas testosteroni
PFams: LigA
Heteromeric, 149 amino acids: PaperBLAST, CDD, Compare to cluster