PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.2.99.8 as complete word(s)

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Found 10 characterized proteins with matching descriptions. 10 of these are heteromeric.

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 10 of these sequences

Found 3 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 706-748 amino acids (heteromeric)

F9VNL4 glyceraldehyde dehydrogenase (FAD-containing) (subunit 3/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 744 amino acids: PaperBLAST, CDD, Compare to cluster

Q96XN5 glyceraldehyde dehydrogenase (FAD-containing) (subunit 3/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 730 amino acids: PaperBLAST, CDD, Compare to cluster

Q96Y29 glyceraldehyde dehydrogenase (FAD-containing) (subunit 3/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 706 amino acids: PaperBLAST, CDD, Compare to cluster

CUTA_SULAC / Q4J6M3 Glyceraldehyde dehydrogenase large chain; Glyceraldehyde dehydrogenase subunit A; Glyceraldehyde dehydrogenase subunit alpha; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: Ald_Xan_dh_C, Ald_Xan_dh_C2
Heteromeric, 748 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 278-283 amino acids (heteromeric)

F9VNL6 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 283 amino acids: PaperBLAST, CDD, Compare to cluster

Q974U9 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 278 amino acids: PaperBLAST, CDD, Compare to cluster

CUTB_SULAC / Q4J6M6 Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 281 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 162-168 amino acids (heteromeric)

F9VNL5 glyceraldehyde dehydrogenase (FAD-containing) (subunit 1/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: Fer2, Fer2_2
Heteromeric, 162 amino acids: PaperBLAST, CDD, Compare to cluster

Q974V0 glyceraldehyde dehydrogenase (FAD-containing) (subunit 1/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: Fer2, Fer2_2
Heteromeric, 168 amino acids: PaperBLAST, CDD, Compare to cluster

CUTC_SULAC / Q4J6M5 Glyceraldehyde dehydrogenase small chain; Glyceraldehyde dehydrogenase subunit C; Glyceraldehyde dehydrogenase subunit gamma; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: Fer2, Fer2_2
Heteromeric, 163 amino acids: PaperBLAST, CDD, Compare to cluster