PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.3.1.13 as complete word(s)

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 431-452 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

TYR1_SCHPO / O60078 Probable prephenate dehydrogenase [NADP(+)]; PRDH; EC 1.3.1.13 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
CH_124806 prephenate dehydrogenase [NADP+] Tyr1 (predicted); EC 1.3.1.13 from Schizosaccharomyces pombe
PFams: NAD_binding_2, F420_oxidored, PDH
431 amino acids: PaperBLAST, CDD, Compare to cluster

TYR1_YEAST / P20049 Prephenate dehydrogenase [NADP(+)]; PRDH; EC 1.3.1.13 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: NAD_binding_2, PDH
452 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

A8AAX2 prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis
PFams: CM_2, Rossmann-like, F420_oxidored, NAD_binding_2, PDH
348 amino acids: PaperBLAST, CDD