PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.3.7.8 as complete word(s)

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Found 14 characterized proteins with matching descriptions. 8 of these are heteromeric.

Fetched 14 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 10 of these sequences

Found 4 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 269-301 amino acids (2/4 heteromeric)

Q8VUG0 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: BcrAD_BadFG
301 amino acids: PaperBLAST, CDD, Compare to cluster

Q8VUG1 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: BcrAD_BadFG
269 amino acids: PaperBLAST, CDD, Compare to cluster

BCRD_THAAR / O87877 Benzoyl-CoA reductase subunit D; 3-hydroxybenzoyl-CoA reductase subunit delta; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87877 benzoyl-CoA reductase δ subunit (EC 1.3.7.8) from Thauera aromatica
PFams: BcrAD_BadFG
Heteromeric, 282 amino acids: PaperBLAST, CDD, Compare to cluster

O07463 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
O07463 BadG (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: BcrAD_BadFG
Heteromeric, 277 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 386-394 amino acids (heteromeric)

BCRC_THAAR / O87874 Benzoyl-CoA reductase subunit C; 3-hydroxybenzoyl-CoA reductase subunit gamma; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87874 benzoyl-CoA reductase γ subunit (EC 1.3.7.8) from Thauera aromatica
PFams: HGD-D
Heteromeric, 386 amino acids: PaperBLAST, CDD, Compare to cluster

O07460 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
O07460 BadD (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: HGD-D
Heteromeric, 394 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 437-438 amino acids (heteromeric)

O07462 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
O07462 BadF (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: BcrAD_BadFG
Heteromeric, 437 amino acids: PaperBLAST, CDD, Compare to cluster

BCRA_THAAR / O87876 Benzoyl-CoA reductase subunit A; 3-hydroxybenzoyl-CoA reductase subunit alpha; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87876 benzoyl-CoA reductase (EC 1.3.7.8) from Thauera aromatica
O87876 benzoyl-CoA reductase α subunit (EC 1.3.7.8) from Thauera aromatica
PFams: BcrAD_BadFG
Heteromeric, 438 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 432-436 amino acids (heteromeric)

O07461 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
O07461 BadE (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: HGD-D
Heteromeric, 436 amino acids: PaperBLAST, CDD, Compare to cluster

BCRB_THAAR / O87875 Benzoyl-CoA reductase subunit B; 3-hydroxybenzoyl-CoA reductase subunit beta; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87875 benzoyl-CoA reductase β subunit (EC 1.3.7.8) from Thauera aromatica
PFams: HGD-D
Heteromeric, 432 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/4 heteromeric)

Q8VUF1 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: AMP-binding, AMP-binding_C
533 amino acids: PaperBLAST, CDD

Q8VUG2 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: HGD-D
434 amino acids: PaperBLAST, CDD

Q8VUG3 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: HGD-D
379 amino acids: PaperBLAST, CDD

CH1CO_SYNAS / Q2LQN9 Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus (strain SB)
Q2LQN9 cyclohex-1-ene-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.7.8; EC 1.3.8.10) from Syntrophus aciditrophicus (strain SB)
PFams: Acyl-CoA_dh_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1, Acyl-CoA_dh_2
414 amino acids: PaperBLAST, CDD