PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 1.4.1.3 as complete word(s)

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Found 25 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 25 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 25 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 411-558 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P96110 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Thermotoga maritima
CH_015463 glutamate dehydrogenase; EC 1.4.1.3 from Thermotoga maritima
PFams: ELFV_dehydrog_N, ELFV_dehydrog
416 amino acids: PaperBLAST, CDD, Compare to cluster

A0A1V1FMC4 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Streptococcus equinus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
449 amino acids: PaperBLAST, CDD, Compare to cluster

O04937 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Nicotiana plumbaginifolia
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

O59650 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Thermococcus kodakarensis
CH_015459 glutamate dehydrogenase (NAD(P)(+)); EC 1.4.1.3 from Thermococcus kodakarensis
PFams: ELFV_dehydrog_N, ELFV_dehydrog
421 amino acids: PaperBLAST, CDD, Compare to cluster

O74024 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Thermococcus profundus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
419 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_BOVIN / P00366 Glutamate dehydrogenase 1, mitochondrial; GDH 1; EC 1.4.1.3 from Bos taurus (Bovine)
P00366 glutamate dehydrogenase (EC 1.4.1.2) from Bos taurus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
558 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_HUMAN / P00367 Glutamate dehydrogenase 1, mitochondrial; GDH 1; EC 1.4.1.3 from Homo sapiens (Human)
P00367 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Homo sapiens
P00367 Glutamate dehydrogenase 1, mitochondrial (EC 1.4.1.3) from Homo sapiens
PFams: ELFV_dehydrog_N, ELFV_dehydrog
558 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_RAT / P10860 Glutamate dehydrogenase 1, mitochondrial; GDH 1; Memory-related gene 2 protein; MRG-2; EC 1.4.1.3 from Rattus norvegicus (Rat)
P10860 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Rattus norvegicus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
558 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_MOUSE / P26443 Glutamate dehydrogenase 1, mitochondrial; GDH 1; EC 1.4.1.3 from Mus musculus (Mouse)
P26443 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Mus musculus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
558 amino acids: PaperBLAST, CDD, Compare to cluster

DHE4_HUMAN / P49448 Glutamate dehydrogenase 2, mitochondrial; GDH 2; EC 1.4.1.3 from Homo sapiens (Human)
P49448 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Homo sapiens
P49448 Glutamate dehydrogenase 2, mitochondrial (EC 1.4.1.3) from Homo sapiens
PFams: ELFV_dehydrog_N, ELFV_dehydrog
558 amino acids: PaperBLAST, CDD, Compare to cluster

P80053 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Saccharolobus solfataricus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
420 amino acids: PaperBLAST, CDD, Compare to cluster

P80319 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Pyrococcus furiosus
PFams: ELFV_dehydrog_N, ELFV_dehydrog
420 amino acids: PaperBLAST, CDD, Compare to cluster

DHE2_ARATH / Q38946 Glutamate dehydrogenase 2; GDH 2; EC 1.4.1.3 from Arabidopsis thaliana (Mouse-ear cress)
Q38946 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Arabidopsis thaliana
Q38946 glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q43314 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Arabidopsis thaliana
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q9LEC8 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Nicotiana plumbaginifolia
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q9S7A0 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Arabidopsis thaliana
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

GB|AAA64795.1 glutamate dehydrogenase (NAD(P)(+)); EC 1.4.1.3 from Pyrococcus endeavori
PFams: ELFV_dehydrog_N, ELFV_dehydrog
420 amino acids: PaperBLAST, CDD, Compare to cluster

DHE4_PRERU / P95544 NAD(P)-specific glutamate dehydrogenase; NAD(P)-GDH; NAD(P)H-dependent glutamate dehydrogenase; EC 1.4.1.3 from Prevotella ruminicola (Bacteroides ruminicola)
PFams: ELFV_dehydrog_N, ELFV_dehydrog
444 amino acids: PaperBLAST, CDD, Compare to cluster

DHE2_ORYSJ / Q33E23 Glutamate dehydrogenase 2, mitochondrial; OsGDH2; EC 1.4.1.3 from Oryza sativa subsp. japonica (Rice)
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_DICDI / Q54KB7 Glutamate dehydrogenase, mitochondrial; GDH; EC 1.4.1.3 from Dictyostelium discoideum (Slime mold)
PFams: ELFV_dehydrog_N, ELFV_dehydrog, AdoHcyase_NAD
502 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_THELN / Q56304 Glutamate dehydrogenase; GDH; EC 1.4.1.3 from Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Q56304 glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3); glutamate dehydrogenase (NADP+) (EC 1.4.1.4) from Thermococcus litoralis
PFams: ELFV_dehydrog_N, ELFV_dehydrog
419 amino acids: PaperBLAST, CDD, Compare to cluster

DHE3_ORYSJ / Q6H3Y7 Glutamate dehydrogenase 3, mitochondrial; OsGDH3; EC 1.4.1.3 from Oryza sativa subsp. japonica (Rice)
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

DHE1_ORYSJ / Q852M0 Glutamate dehydrogenase 1, mitochondrial; OsGDH1; EC 1.4.1.3 from Oryza sativa subsp. japonica (Rice)
Q852M0 glutamate dehydrogenase (EC 1.4.1.2) from Oryza sativa
PFams: ELFV_dehydrog_N, ELFV_dehydrog
411 amino acids: PaperBLAST, CDD, Compare to cluster

P93541 glutamate dehydrogenase (EC 1.4.1.2) from Solanum lycopersicum
P93541 glutamate dehydrogenase (EC 1.4.1.3) from Solanum lycopersicum
PFams: ELFV_dehydrog_N, ELFV_dehydrog
412 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

DHE3_DROME / P54385 Glutamate dehydrogenase, mitochondrial; GDH; EC 1.4.1.3 from Drosophila melanogaster (Fruit fly)
PFams: ELFV_dehydrog_N, ELFV_dehydrog
562 amino acids: PaperBLAST, CDD
(similar to BRENDA::P00366 from Cluster 1, but similarity to seed sequence is below thresholds)