PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.3.1.182

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Found 5 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 491-528 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

B0K6M2 (R)-citramalate synthase (EC 2.3.1.182) from Thermoanaerobacter sp.
PFams: HMGL-like, LeuA_dimer
520 amino acids: PaperBLAST, CDD, Compare to cluster

CIMA_METJA / Q58787 (R)-citramalate synthase CimA; EC 2.3.1.182 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Q58787 citramalate lyase (EC 4.1.3.22) from Methanocaldococcus jannaschii
Q58787 (R)-citratemalate synthase subunit (EC 2.3.1.182) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
PFams: HMGL-like, LeuA_dimer
491 amino acids: PaperBLAST, CDD, Compare to cluster

CIMA_GEOSL / Q74C76 (R)-citramalate synthase; Citramalate synthase; EC 2.3.1.182 from Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Q74C76 (R)-citramalate synthase (EC 2.3.1.182) from Geobacter sulfurreducens
PFams: HMGL-like, LeuA_dimer
528 amino acids: PaperBLAST, CDD, Compare to cluster

CIMA_SULAC / Q4J6H1 (R)-citramalate synthase; Citramalate synthase; CMS; EC 2.3.1.182 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: HMGL-like, LeuA_dimer
523 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q8F3Q1 (R)-citramalate synthase subunit (EC 2.3.1.182) from Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
PFams: HMGL-like, LeuA_dimer
516 amino acids: PaperBLAST, CDD
(similar to BRENDA::Q58787 from Cluster 1, but similarity to seed sequence is below thresholds)