PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.3.1.54 as complete word(s)

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Found 9 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 8 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 740-852 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A0A0H2ZQE4 formate C-acetyltransferase (EC 2.3.1.54) from Streptococcus pneumoniae
PFams: PFL-like, Gly_radical
774 amino acids: PaperBLAST, CDD, Compare to cluster

O66391 formate C-acetyltransferase (EC 2.3.1.54) from Streptococcus equinus
PFams: PFL-like, Gly_radical
774 amino acids: PaperBLAST, CDD, Compare to cluster

b0903 pyruvate formate-lyase from Escherichia coli K-12 substr. MG1655
P09373 formate C-acetyltransferase (EC 2.3.1.54) from Escherichia coli
PFams: PFL-like, Gly_radical
760 amino acids: PaperBLAST, CDD, Compare to cluster

Q46266 pyruvate formate-lyase subunit (EC 2.3.1.54) from Clostridium pasteurianum
Q46266 formate C-acetyltransferase (EC 2.3.1.54) from Clostridium pasteurianum
PFams: PFL-like, Gly_radical
740 amino acids: PaperBLAST, CDD, Compare to cluster

TDCE_ECOLI / P42632 PFL-like enzyme TdcE; Keto-acid formate acetyltransferase; Keto-acid formate-lyase; Ketobutyrate formate-lyase; KFL; Pyruvate formate-lyase; PFL; EC 2.3.1.-; EC 2.3.1.54 from Escherichia coli (strain K12)
EW|b3114 pyruvate formate-lyase 4/2-ketobutyrate formate-lyase from Escherichia coli K12
PFams: PFL-like, Gly_radical
764 amino acids: PaperBLAST, CDD, Compare to cluster

PFLB_STAAC / Q5HJF4 Formate acetyltransferase; Pyruvate formate-lyase; EC 2.3.1.54 from Staphylococcus aureus (strain COL)
PFams: PFL-like, Gly_radical
749 amino acids: PaperBLAST, CDD, Compare to cluster

Q59934 pyruvate formate-lyase subunit (EC 2.3.1.54) from Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
PFams: PFL-like, Gly_radical
775 amino acids: PaperBLAST, CDD, Compare to cluster

Q1RS83 pyruvate formate lyase (EC 2.3.1.54) from Chlamydomonas reinhardtii
Q1RS83 formate C-acetyltransferase (EC 2.3.1.54) from Chlamydomonas reinhardtii
PFams: PFL-like, Gly_radical
852 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

O28823 formate C-acetyltransferase (EC 2.3.1.54) from Archaeoglobus fulgidus
PFams: PFL-like, Gly_radical
776 amino acids: PaperBLAST, CDD