PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.4.2.15 as complete word(s)

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Found 5 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 267-289 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b2407 xanthosine phosphorylase (EC 2.4.2.1; EC 2.4.2.15) from Escherichia coli K-12 substr. MG1655
XAPA_ECOLI / P45563 Purine nucleoside phosphorylase 2; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase II; PNP II; Xanthosine phosphorylase; EC 2.4.2.1 from Escherichia coli (strain K12)
P45563 xanthosine phosphorylase (EC 2.4.2.1; EC 2.4.2.15) from Escherichia coli (strain K12)
PFams: PNP_UDP_1
277 amino acids: PaperBLAST, CDD, Compare to cluster

PNPH_HUMAN / P00491 Purine nucleoside phosphorylase; PNP; Inosine phosphorylase; Inosine-guanosine phosphorylase; EC 2.4.2.1 from Homo sapiens (Human)
P00491 purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens
P00491 purine nucleoside phosphorylase subunit (EC 2.4.2.1; EC 2.4.2.15) from Homo sapiens
PFams: PNP_UDP_1
289 amino acids: PaperBLAST, CDD, Compare to cluster

Q5JJB8 guanosine phosphorylase (EC 2.4.2.15) from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
PFams: PNP_UDP_1
267 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

b4384 purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli K-12 substr. MG1655
DEOD_ECOLI / P0ABP8 Purine nucleoside phosphorylase DeoD-type; PNP; Inosine phosphorylase; EC 2.4.2.1 from Escherichia coli (strain K12)
P0ABP8 purine-nucleoside phosphorylase (EC 2.4.2.1) from Escherichia coli
P0ABP8 purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli (strain K12)
RF|NP_418801 purine nucleoside phosphorylase deoD-type; EC 2.4.2.1 from Escherichia coli K12
PFams: PNP_UDP_1
239 amino acids: PaperBLAST, CDD

b0391 nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli K-12 substr. MG1655
PPNP_ECOLI / P0C037 Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.15; EC 2.4.2.4; EC 2.4.2.3 from Escherichia coli (strain K12)
P0C037 nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.2; EC 2.4.2.1) from Escherichia coli (strain K12)
PFams: Ppnp
94 amino acids: PaperBLAST, CDD