PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.6.1.6 as complete word(s)

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Found 6 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 286-309 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b3770 branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli K-12 substr. MG1655
P0AB80 branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli (strain K12)
P0AB80 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Escherichia coli
RF|YP_026247 branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli K12
PFams: Aminotran_4
309 amino acids: PaperBLAST, CDD, Compare to cluster

O86428 branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: Aminotran_4
307 amino acids: PaperBLAST, CDD, Compare to cluster

A6UWA0 branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
PFams: Aminotran_4
286 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/3 heteromeric)

P38891 branched-chain amino acid aminotransferase subunit (EC 2.6.1.42; EC 2.6.1.6) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
BCA1_YEAST / P38891 Branched-chain-amino-acid aminotransferase, mitochondrial; BCAT; Protein ECA39; Protein TWT1; EC 2.6.1.42 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
P38891 branched-chain-amino-acid transaminase (EC 2.6.1.42) from Saccharomyces cerevisiae
PFams: Aminotran_4
393 amino acids: PaperBLAST, CDD

Q9S7N2 tryptophan aminotransferase (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.2; EC 2.6.1.6; EC 2.6.1.27; EC 2.6.1.99) from Arabidopsis thaliana
TAA1_ARATH / Q9S7N2 L-tryptophan--pyruvate aminotransferase 1; Protein CYTOKININ INDUCED ROOT CURLING 1; Protein SHADE AVOIDANCE 3; Protein TRANSPORT INHIBITOR RESPONSE 2; Protein TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1; Protein WEAK ETHYLENE INSENSITIVE 8; Tryptophan transaminase; EC 2.6.1.27; EC 2.6.1.99 from Arabidopsis thaliana (Mouse-ear cress)
Q9S7N2 tryptophan transaminase (EC 2.6.1.27); L-tryptophan-pyruvate aminotransferase (EC 2.6.1.99) from Arabidopsis thaliana
PFams: Alliinase_C, Aminotran_1_2
391 amino acids: PaperBLAST, CDD

b4054 tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.1) from Escherichia coli K-12 substr. MG1655
P04693 tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.27; EC 2.6.1.1) from Escherichia coli (strain K12)
TYRB_ECOLI / P04693 Aromatic-amino-acid aminotransferase; ARAT; AROAT; Beta-methylphenylalanine transaminase; EC 2.6.1.57; EC 2.6.1.107 from Escherichia coli (strain K12)
GB|AAC77024.1 aromatic-amino-acid transaminase TyrB; EC 2.6.1.57 from Escherichia coli K12
PFams: Aminotran_1_2
397 amino acids: PaperBLAST, CDD