PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.6.1.79 as complete word(s)

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Found 7 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 7 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 397-479 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

PAT_ARATH / Q9SIE1 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana (Mouse-ear cress)
Q9SIE1 aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
475 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_RHOS1 / A3PMF8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster

PAT_PETHY / E9L7A5 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida (Petunia)
PFams: Aminotran_1_2
479 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_RHIME / Q02635 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.79 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Q02635 aspartate transaminase (EC 2.6.1.1); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Sinorhizobium meliloti
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_NITEU / Q82WA8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.79 from Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
PFams: Aminotran_1_2, DegT_DnrJ_EryC1, Aminotran_MocR
397 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

P54691 branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.
PFams: Aminotran_4
305 amino acids: PaperBLAST, CDD

Q82IK5 succinyldiaminopimelate transaminase (EC 2.6.1.17); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Streptomyces avermitilis
PFams: Aminotran_1_2
364 amino acids: PaperBLAST, CDD