PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.6.1.83 as complete word(s)

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Found 22 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 22 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 22 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 387-461 amino acids (not heteromeric)

O66630 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus
PFams: Aminotran_1_2
387 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_SYNFM / A0LEA5 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
A0LEA5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans
PFams: Aminotran_1_2
388 amino acids: PaperBLAST, CDD, Compare to cluster

A8IW39 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydomonas reinhardtii
PFams: Aminotran_1_2
441 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_METTH / O26158 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum)
O26158 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanothermobacter thermautotrophicus
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster

Q2NFU1 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosphaera stadtmanae
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q3MAL4 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q3MDN5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_SYNY3 / Q55828 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Synechocystis sp. (strain PCC 6803 / Kazusa)
Q55828 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Synechocystis sp.
PFams: Aminotran_1_2
412 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_BACFN / Q5LC03 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343)
Q5LC03 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Bacteroides fragilis
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_LEPIC / Q72NJ3 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Q72NJ3 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Leptospira interrogans
PFams: Aminotran_1_2
408 amino acids: PaperBLAST, CDD, Compare to cluster

Q74GT3 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Geobacter sulfurreducens
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_GLOVI / Q7NDX4 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q7NDX4 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus
PFams: Aminotran_1_2
392 amino acids: PaperBLAST, CDD, Compare to cluster

Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans
PFams: Aminotran_1_2
389 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_ARATH / Q93ZN9 LL-diaminopimelate aminotransferase, chloroplastic; AtDAP-AT; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; Protein ABERRANT GROWTH AND DEATH 2; EC 2.6.1.83 from Arabidopsis thaliana (Mouse-ear cress)
Q93ZN9 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
Q93ZN9 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
PFams: Aminotran_1_2
461 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_HUNT2 / A3DK17 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)
PFams: Aminotran_1_2
410 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_DESHD / Q18T09 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Desulfitobacterium hafniense (strain DCB-2 / DSM 10664)
Q18T09 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Desulfitobacterium hafniense
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_MOOTA / Q2RK33 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
Q2RK33 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_METJA / Q58786 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Q58786 L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
PFams: Aminotran_1_2
418 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_METMP / Q6LX26 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Methanococcus maripaludis (strain S2 / LL)
PFams: Aminotran_1_2
416 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_PARUW / Q6MDE0 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Protochlamydia amoebophila (strain UWE25)
Q6MDE0 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Candidatus Protochlamydia amoebophila
PFams: Aminotran_1_2
411 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 394-456 amino acids (not heteromeric)

ALD1_ARATH / Q9ZQI7 Aminotransferase ALD1, chloroplastic; AGD2-like defense response protein 1; EC 2.6.1.- from Arabidopsis thaliana (Mouse-ear cress)
Q9ZQI7 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
Q9ZQI7 lysine aminotransferase from Arabidopsis thaliana
PFams: Aminotran_1_2, Alliinase_C
456 amino acids: PaperBLAST, CDD, Compare to cluster

DAPAT_CHLTR / O84395 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Chlamydia trachomatis (strain D/UW-3/Cx)
O84395 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Chlamydia trachomatis
PFams: Aminotran_1_2
394 amino acids: PaperBLAST, CDD, Compare to cluster