PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.6.1.96

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Found 7 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 7 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 458-520 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q7XN12 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa
PFams: Aminotran_3
497 amino acids: PaperBLAST, CDD, Compare to cluster

Q94CE5 γ-aminobutyrate transaminase (pyruvate dependent) (EC 2.6.1.96) from Arabidopsis thaliana
GATP_ARATH / Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial; AtGABA-T; Gamma-aminobutyric acid aminotransferase 1; Protein HEXENAL RESPONSE 1; Protein POLLEN-PISTIL INCOMPATIBILITY 2; AtPOP2; EC 2.6.1.96 from Arabidopsis thaliana (Mouse-ear cress)
Q94CE5 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Arabidopsis thaliana
PFams: Aminotran_3
504 amino acids: PaperBLAST, CDD, Compare to cluster

GATP4_ORYSJ / Q6ZH29 Probable gamma-aminobutyrate transaminase 4; OsGABA-T; EC 2.6.1.96 from Oryza sativa subsp. japonica (Rice)
Q6ZH29 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa
PFams: Aminotran_3
483 amino acids: PaperBLAST, CDD, Compare to cluster

GATP1_ORYSJ / Q7XN11 Gamma-aminobutyrate transaminase 1, mitochondrial; EC 2.6.1.96 from Oryza sativa subsp. japonica (Rice)
Q7XN11 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Oryza sativa
PFams: Aminotran_3
516 amino acids: PaperBLAST, CDD, Compare to cluster

GATP3_SOLLC / Q84P52 Gamma aminobutyrate transaminase 3, chloroplastic; Gamma-aminobutyrate transaminase isozyme 3; LeGABA-TP3; SlGABA-T3; EC 2.6.1.96 from Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Q84P52 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum
PFams: Aminotran_3
520 amino acids: PaperBLAST, CDD, Compare to cluster

Q84P53 gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
GATP2_SOLLC / Q84P53 Gamma aminobutyrate transaminase 2; Gamma-aminobutyrate transaminase isozyme 2; LeGABA-TP2; SlGABA-T2; EC 2.6.1.96 from Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Q84P53 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum
PFams: Aminotran_3
458 amino acids: PaperBLAST, CDD, Compare to cluster

Q84P54 gamma aminobutyrate transaminase (EC 2.6.1.96) from Solanum lycopersicum
GATP1_SOLLC / Q84P54 Gamma aminobutyrate transaminase 1, mitochondrial; Gamma-aminobutyrate transaminase isozyme 1; LeGABA-TP1; SlGABA-T1; EC 2.6.1.96 from Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Q84P54 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19); 4-aminobutyrate-pyruvate transaminase (EC 2.6.1.96) from Solanum lycopersicum
PFams: Aminotran_3
515 amino acids: PaperBLAST, CDD, Compare to cluster