PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.7.1.16 as complete word(s)

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Found 5 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 560-566 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q9KBQ3 ribulokinase (EC 2.7.1.16) from Bacillus halodurans
PFams: FGGY_N, FGGY_C
563 amino acids: PaperBLAST, CDD, Compare to cluster

b0063 ribulokinase (EC 2.7.1.16) from Escherichia coli K-12 substr. MG1655
P08204 ribulokinase (EC 2.7.1.16) from Escherichia coli (strain K12)
ARAB_ECOLI / P08204 Ribulokinase; EC 2.7.1.16 from Escherichia coli (strain K12)
CH_002149 ribulokinase; EC 2.7.1.16 from Escherichia coli
PFams: FGGY_C
566 amino acids: PaperBLAST, CDD, Compare to cluster

ARAB_BACSU / P94524 Ribulokinase; EC 2.7.1.16 from Bacillus subtilis (strain 168)
PFams: FGGY_N, FGGY_C
560 amino acids: PaperBLAST, CDD, Compare to cluster

Echvi_0515 Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis KMM 6221, DSM 17526
PFams: FGGY_N, FGGY_C
562 amino acids: PaperBLAST, CDD, Compare to cluster

CA265_RS08625 Ribulokinase (EC 2.7.1.16) from Pedobacter sp. GW460-11-11-14-LB5
PFams: FGGY_N, FGGY_C
566 amino acids: PaperBLAST, CDD, Compare to cluster