PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.7.1.39 as complete word(s)

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Found 7 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 7 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 296-370 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b0003 homoserine kinase (EC 2.7.1.39) from Escherichia coli K-12 substr. MG1655
P00547 homoserine kinase (EC 2.7.1.39) from Escherichia coli (strain K12)
KHSE_ECOLI / P00547 Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli (strain K12)
GB|BAB96580.2 homoserine kinase; EC 2.7.1.39 from Escherichia coli
PFams: GHMP_kinases_N, GHMP_kinases_C
310 amino acids: PaperBLAST, CDD, Compare to cluster

Q8L7R2 homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana
KHSE_ARATH / Q8L7R2 Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39 from Arabidopsis thaliana (Mouse-ear cress)
Q8L7R2 homoserine kinase (EC 2.7.1.39) from Arabidopsis thaliana
PFams: GHMP_kinases_N, GHMP_kinases_C
370 amino acids: PaperBLAST, CDD, Compare to cluster

KHSE_METMP / Q6M0H5 Homoserine kinase; HK; HSK; EC 2.7.1.39 from Methanococcus maripaludis (strain S2 / LL)
PFams: GHMP_kinases_N, GHMP_kinases_C
301 amino acids: PaperBLAST, CDD, Compare to cluster

Q58504 homoserine kinase monomer (EC 2.7.1.39) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
PFams: GHMP_kinases_N, GHMP_kinases_C
296 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/3 heteromeric)

KHSE_YEAST / P17423 Homoserine kinase; HK; HSK; EC 2.7.1.39 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: GHMP_kinases_N
357 amino acids: PaperBLAST, CDD

KHSE_PSEAE / P29364 Homoserine kinase; HK; HSK; EC 2.7.1.39 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: APH
316 amino acids: PaperBLAST, CDD

DvMF_0971 Homoserine kinase (EC:2.7.1.39) from Desulfovibrio vulgaris Miyazaki F
PFams: Cytidylate_kin, AAA_33, SKI
185 amino acids: PaperBLAST, CDD