PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.1.1.48 as complete word(s)

Or try another search

Found 8 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 8 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 227-272 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P84126 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus
PFams: IGPS
254 amino acids: PaperBLAST, CDD, Compare to cluster

A1KJ27 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis variant bovis BCG
A5U2W7 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis H37Ra
P9WFX7 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis
PFams: IGPS
272 amino acids: PaperBLAST, CDD, Compare to cluster

Q06121 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Saccharolobus solfataricus
PFams: IGPS
248 amino acids: PaperBLAST, CDD, Compare to cluster

Q9YGB5 indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q9YGB5 indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermococcus kodakarensis
PFams: IGPS
227 amino acids: PaperBLAST, CDD, Compare to cluster

Q56319 indole-3-glycerol phosphate synthase (EC 4.1.1.48) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: IGPS
252 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/3 heteromeric)

b1262 fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli K-12 substr. MG1655
P00909 fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli (strain K12)
P00909 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Escherichia coli
PFams: IGPS, PRAI
453 amino acids: PaperBLAST, CDD

TRPG_YEAST / P00937 Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: GATase, Peptidase_C26, IGPS, QRPTase_C
484 amino acids: PaperBLAST, CDD

TRPC_ARATH / P49572 Indole-3-glycerol phosphate synthase, chloroplastic; IGPS; EC 4.1.1.48 from Arabidopsis thaliana (Mouse-ear cress)
PFams: IGPS
402 amino acids: PaperBLAST, CDD