PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.1.2.5 as complete word(s)

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Found 6 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 346-346 amino acids (not heteromeric)

Q88R13 L-threonine aldolase (EC 4.1.2.5) from Pseudomonas putida
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_1114 L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens GW456-L13
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_07670 L-threonine aldolase (EC 4.1.2.5) from Pseudomonas fluorescens FW300-N2E3
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 333-387 amino acids (not heteromeric)

Q9X266 L-threonine aldolase (EC 4.1.2.5) from Thermotoga maritima
PFams: Beta_elim_lyase, Aminotran_1_2, DegT_DnrJ_EryC1, Cys_Met_Meta_PP, Aminotran_5
343 amino acids: PaperBLAST, CDD, Compare to cluster

b0870 low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49) from Escherichia coli K-12 substr. MG1655
P75823 low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.26) from Escherichia coli (strain K12)
LTAE_ECOLI / P75823 Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48 from Escherichia coli (strain K12)
P75823 low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli
GB|BAA20882.1 threonine aldolase; EC 4.1.2.5 from Escherichia coli K12
PFams: Beta_elim_lyase, Aminotran_1_2
333 amino acids: PaperBLAST, CDD, Compare to cluster

GB|AAA72430.1 threonine aldolase; EC 4.1.2.5 from Saccharomyces cerevisiae
PFams: Beta_elim_lyase
387 amino acids: PaperBLAST, CDD, Compare to cluster