PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.2.1.140 as complete word(s)

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 382-395 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

GAD_SACS2 / Q97U27 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Q97U27 gluconate/galactonate dehydratase (EC 4.2.1.140) from Saccharolobus solfataricus
PFams: MR_MLE_N, MR_MLE_C
395 amino acids: PaperBLAST, CDD, Compare to cluster

GAD_PICTO / Q6L1T2 D-gluconate/D-galactonate dehydratase; GAD; GNAD; EC 4.2.1.140; EC 4.2.1.39; EC 4.2.1.6 from Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
Q6L1T2 gluconate/galactonate dehydratase (EC 4.2.1.140); gluconate dehydratase (EC 4.2.1.39) from Picrophilus torridus
PFams: MR_MLE_N, MR_MLE_C
391 amino acids: PaperBLAST, CDD, Compare to cluster

b4478 D-galactonate dehydratase (EC 4.2.1.140; EC 4.2.1.6) from Escherichia coli K-12 substr. MG1655
Q6BF17 D-galactonate dehydratase (EC 4.2.1.140) from Escherichia coli (strain K12)
DGOD_ECOLI / Q6BF17 D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli (strain K12)
RF|YP_026237 D-galactonate dehydratase; EC 4.2.1.6 from Escherichia coli K12
PFams: MR_MLE_N, MR_MLE_C
382 amino acids: PaperBLAST, CDD, Compare to cluster