PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.2.1.44 as complete word(s)

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Found 9 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 8 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 295-306 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P42416 scyllo-inosose dehydratase (EC 4.2.1.44) from Bacillus subtilis (strain 168)
IOLE_BACSU / P42416 Inosose dehydratase; 2-keto-myo-inositol dehydratase; 2KMI dehydratase; EC 4.2.1.44 from Bacillus subtilis (strain 168)
PFams: AP_endonuc_2
297 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS13920 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Burkholderia phytofirmans PsJN
PFams: AP_endonuc_2
305 amino acids: PaperBLAST, CDD, Compare to cluster

HSERO_RS12135 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Herbaspirillum seropedicae SmR1
PFams: AP_endonuc_2
306 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00433 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Sinorhizobium meliloti 1021
PFams: AP_endonuc_2
300 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas simiae WCS417
PFams: AP_endonuc_2
295 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_21340 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2E3
PFams: AP_endonuc_2
297 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_23165 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2C3
PFams: AP_endonuc_2
297 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_513 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Pseudomonas fluorescens FW300-N2E2
PFams: AP_endonuc_2
297 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

PGA1_c07270 Myo-inosose-2 dehydratase (EC 4.2.1.44) from Phaeobacter inhibens BS107
PFams: AP_endonuc_2
297 amino acids: PaperBLAST, CDD