PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.2.1.68 as complete word(s)

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Found 5 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 441-452 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

G3Y683 L-fuconate dehydratase (EC 4.2.1.68) from Aspergillus niger
PFams: MR_MLE_N, MR_MLE_C
452 amino acids: PaperBLAST, CDD, Compare to cluster

ENOF1_HUMAN / Q7L5Y1 Mitochondrial enolase superfamily member 1; Antisense RNA to thymidylate synthase; rTS; L-fuconate dehydratase; EC 4.2.1.68 from Homo sapiens (Human)
PFams: MR_MLE_N, MR_MLE_C
443 amino acids: PaperBLAST, CDD, Compare to cluster

FUCD_XANCP / Q8P3K2 L-fuconate dehydratase; FucD; EC 4.2.1.68 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
PFams: MR_MLE_N, MR_MLE_C
441 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

BPHYT_RS34230 L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans PsJN
PFams: GD_AH_C
431 amino acids: PaperBLAST, CDD

BPHYT_RS34235 putative accessory domain for L-fuconate/L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) from Burkholderia phytofirmans PsJN
PFams: SAF
110 amino acids: PaperBLAST, CDD