PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.2.1.83 as complete word(s)

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 342-342 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q93PS9 4-carboxy-2-hydroxymuconate hydratase (EC 4.2.1.83) from Comamonas testosteroni
Q93PS9 4-oxalomesaconate hydratase (EC 4.2.1.83) from Comamonas testosteroni
PFams: Amidohydro_2
342 amino acids: PaperBLAST, CDD, Compare to cluster

Q9AQI1 subunit of 4-oxalomesaconate hydratase (EC 4.2.1.83) from Pseudomonas straminea
PFams: Amidohydro_2
342 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

GALB_PSEPK / Q88JX8 4-oxalmesaconate hydratase; OMA hydratase; Gallate degradation protein B; EC 4.2.1.83 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
PFams: PIG-L
258 amino acids: PaperBLAST, CDD