PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 4.3.1.3 as complete word(s)

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Found 20 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 20 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 20 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 497-677 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

HUTH_DICDI / Q54JI7 Probable histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Dictyostelium discoideum (Slime mold)
Q54JI7 phenylalanine ammonia-lyase (EC 4.3.1.24) from Dictyostelium discoideum
PFams: Lyase_aromatic
539 amino acids: PaperBLAST, CDD, Compare to cluster

F6RBJ7 histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis
PFams: Par3_HAL_N_term, Lyase_aromatic
664 amino acids: PaperBLAST, CDD, Compare to cluster

P21310 histidase subunit (EC 4.3.1.3) from Pseudomonas putida
HUTH_PSEPU / P21310 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida (Arthrobacter siderocapsulatus)
P21310 histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas putida
PFams: Lyase_aromatic
510 amino acids: PaperBLAST, CDD, Compare to cluster

P42357 histidase subunit (EC 4.3.1.3) from Homo sapiens
HUTH_HUMAN / P42357 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Homo sapiens (Human)
P42357 histidine ammonia-lyase (EC 4.3.1.3) from Homo sapiens
PFams: Par3_HAL_N_term, Lyase_aromatic
657 amino acids: PaperBLAST, CDD, Compare to cluster

Q0VGW8 histidine ammonia-lyase (EC 4.3.1.3) from Xenopus laevis
PFams: Par3_HAL_N_term, Lyase_aromatic
664 amino acids: PaperBLAST, CDD, Compare to cluster

Q6AZU6 histidine ammonia-lyase (EC 4.3.1.3) from Xenopus tropicalis
PFams: Par3_HAL_N_term, Lyase_aromatic
658 amino acids: PaperBLAST, CDD, Compare to cluster

HUTH_RAT / P21213 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus (Rat)
PFams: Par3_HAL_N_term, Lyase_aromatic
657 amino acids: PaperBLAST, CDD, Compare to cluster

HUTH1_CAEEL / Q20502 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans
PFams: Par3_HAL_N_term, Lyase_aromatic
677 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS07555 Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans PsJN
PFams: Lyase_aromatic
506 amino acids: PaperBLAST, CDD, Compare to cluster

Ga0059261_3963 Histidine ammonia-lyase (EC 4.3.1.3) from Sphingomonas koreensis DSMZ 15582
PFams: Lyase_aromatic
497 amino acids: PaperBLAST, CDD, Compare to cluster

BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) from Klebsiella michiganensis M5al
PFams: Lyase_aromatic
507 amino acids: PaperBLAST, CDD, Compare to cluster

CA265_RS22270 Histidine ammonia-lyase (EC 4.3.1.3) from Pedobacter sp. GW460-11-11-14-LB5
PFams: Lyase_aromatic
511 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c36340 Histidine ammonia-lyase (EC 4.3.1.3) from Phaeobacter inhibens BS107
PFams: Lyase_aromatic
507 amino acids: PaperBLAST, CDD, Compare to cluster

Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) from Shewanella amazonensis SB2B
PFams: Lyase_aromatic
497 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b21165 Histidine ammonia-lyase (EC 4.3.1.3) from Sinorhizobium meliloti 1021
PFams: Lyase_aromatic
511 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_2558 Histidine ammonia-lyase (EC 4.3.1.3) from Acidovorax sp. GW101-3H11
PFams: Lyase_aromatic
512 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_320 Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens GW456-L13
PFams: Lyase_aromatic
510 amino acids: PaperBLAST, CDD, Compare to cluster

Pf1N1B4_1582 Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens FW300-N1B4
PFams: Lyase_aromatic
507 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_09605 Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens FW300-N2C3
PFams: Lyase_aromatic
507 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_3799 Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens FW300-N2E2
PFams: Lyase_aromatic
510 amino acids: PaperBLAST, CDD, Compare to cluster