PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 5.3.1.24 as complete word(s)

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Found 13 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 13 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 3 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 205-275 amino acids (not heteromeric)

TRPF_YEAST / P00912 N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; EC 5.3.1.24 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: PRAI
224 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0H4BJU5 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Saccharomycopsis fibuligera
PFams: PRAI
252 amino acids: PaperBLAST, CDD, Compare to cluster

Q8U092 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Pyrococcus furiosus
PFams: PRAI
208 amino acids: PaperBLAST, CDD, Compare to cluster

CH_123631 N-(5'-phosphoribosyl)anthranilate isomerase; EC 5.3.1.24 from Candida albicans
PFams: PRAI
226 amino acids: PaperBLAST, CDD, Compare to cluster

PAI1_ARATH / Q42440 N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic; EC 5.3.1.24 from Arabidopsis thaliana (Mouse-ear cress)
PFams: PRAI
275 amino acids: PaperBLAST, CDD, Compare to cluster

PAI2_ARATH / Q42527 N-(5'-phosphoribosyl)anthranilate isomerase 2, chloroplastic; EC 5.3.1.24 from Arabidopsis thaliana (Mouse-ear cress)
PFams: PRAI
275 amino acids: PaperBLAST, CDD, Compare to cluster

Q56320 phosphoribosylanthranilate isomerase subunit (EC 5.3.1.24) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: PRAI
205 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 453-531 amino acids (not heteromeric)

b1262 fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli K-12 substr. MG1655
P00909 fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (EC 4.1.1.48; EC 5.3.1.24) from Escherichia coli (strain K12)
P00909 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Escherichia coli
PFams: IGPS, PRAI
453 amino acids: PaperBLAST, CDD, Compare to cluster

P24920 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Phytophthora parasitica
PFams: IGPS, PRAI
531 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 213-235 amino acids (not heteromeric)

GB|AAA21897.1 phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Acinetobacter calcoaceticus
PFams: PRAI
213 amino acids: PaperBLAST, CDD, Compare to cluster

CH_021917 phosphoribosylanthranilate isomerase; EC 5.3.1.24 from Burkholderia multivorans ATCC 17616
PFams: PRAI
235 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

B0B7P4 phosphoribosylanthranilate isomerase (EC 5.3.1.24; EC 4.2.1.160) from Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B)
B0B7P4 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase (EC 4.2.1.160); phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Chlamydia trachomatis
PFams: PRAI
208 amino acids: PaperBLAST, CDD
(similar to metacyc::MONOMER-301 from Cluster 1, but similarity to seed sequence is below thresholds)

HIS4_STRCO / P16250 Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P16250 phosphoribosylanthranilate isomerase (EC 5.3.1.24) from Streptomyces coelicolor
PFams: His_biosynth
240 amino acids: PaperBLAST, CDD