PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 5.3.1.25 as complete word(s)

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Found 4 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 591-606 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A4XJ56 L-fucose isomerase (EC 5.3.1.25); D-arabinose isomerase (EC 5.3.1.3) from Caldicellulosiruptor saccharolyticus
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
604 amino acids: PaperBLAST, CDD, Compare to cluster

B8E1T1 L-fucose isomerase (EC 5.3.1.25) from Dictyoglomus turgidum
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
606 amino acids: PaperBLAST, CDD, Compare to cluster

C0SSE7 L-fucose isomerase (EC 5.3.1.25); D-arabinose isomerase (EC 5.3.1.3) from Aeribacillus pallidus
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
595 amino acids: PaperBLAST, CDD, Compare to cluster

b2802 L-fucose isomerase (EC 5.3.1.25; EC 5.3.1.3) from Escherichia coli K-12 substr. MG1655
P69922 L-fucose isomerase (EC 5.3.1.25; EC 5.3.1.3) from Escherichia coli (strain K12)
FUCI_ECOLI / P69922 L-fucose isomerase; FucIase; 6-deoxy-L-galactose isomerase; D-arabinose isomerase; EC 5.3.1.25; EC 5.3.1.3 from Escherichia coli (strain K12)
P69922 L-fucose isomerase (EC 5.3.1.25) from Escherichia coli
RF|NP_417282 FucIase; EC 5.3.1.25 from Escherichia coli K12
PFams: Fucose_iso_N1, Fucose_iso_N2, Fucose_iso_C
591 amino acids: PaperBLAST, CDD, Compare to cluster