PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 5.4.99.5 as complete word(s)

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Found 39 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 39 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 32 of these sequences

Found 7 clusters of similar sequences. Another 7 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 253-340 amino acids (not heteromeric)

A0A0S0FTT9 chorismate mutase (EC 5.4.99.5) from Trichoderma parareesei
266 amino acids: PaperBLAST, CDD, Compare to cluster

A0A2K1JMA3 chorismate mutase (EC 5.4.99.5) from Physcomitrella patens
297 amino acids: PaperBLAST, CDD, Compare to cluster

A9S498 chorismate mutase (EC 5.4.99.5) from Physcomitrella patens
316 amino acids: PaperBLAST, CDD, Compare to cluster

D2CSU4 chorismate mutase (EC 5.4.99.5) from Petunia x hybrida
324 amino acids: PaperBLAST, CDD, Compare to cluster

D2CSU5 chorismate mutase (EC 5.4.99.5) from Petunia x hybrida
263 amino acids: PaperBLAST, CDD, Compare to cluster

D8R1Y1 chorismate mutase (EC 5.4.99.5) from Selaginella moellendorffii
267 amino acids: PaperBLAST, CDD, Compare to cluster

P42738 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
CM1_ARATH / P42738 Chorismate mutase 1, chloroplastic; AtCM1; CM-1; EC 5.4.99.5 from Arabidopsis thaliana (Mouse-ear cress)
P42738 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
340 amino acids: PaperBLAST, CDD, Compare to cluster

Q9C544 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
CM3_ARATH / Q9C544 Chorismate mutase 3, chloroplastic; AtCM3; CM-3; EC 5.4.99.5 from Arabidopsis thaliana (Mouse-ear cress)
Q9C544 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
316 amino acids: PaperBLAST, CDD, Compare to cluster

Q9S7H4 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
CM2_ARATH / Q9S7H4 Chorismate mutase 2; AtCM2; CM-2; EC 5.4.99.5 from Arabidopsis thaliana (Mouse-ear cress)
Q9S7H4 chorismate mutase (EC 5.4.99.5) from Arabidopsis thaliana
265 amino acids: PaperBLAST, CDD, Compare to cluster

U5D896 chorismate mutase (EC 5.4.99.5) from Amborella trichopoda
292 amino acids: PaperBLAST, CDD, Compare to cluster

W1PFX5 chorismate mutase (EC 5.4.99.5) from Amborella trichopoda
328 amino acids: PaperBLAST, CDD, Compare to cluster

CH_122283 chorismate mutase; EC 5.4.99.5 from Emericella nidulans
267 amino acids: PaperBLAST, CDD, Compare to cluster

CM1_MAIZE / B4FNK8 Chorismate mutase 1, chloroplastic; ZmCM1; EC 5.4.99.5 from Zea mays (Maize)
312 amino acids: PaperBLAST, CDD, Compare to cluster

CM2_MAIZE / B4FUP5 Chorismate mutase 2, cytosolic; ZmCM2; EC 5.4.99.5 from Zea mays (Maize)
253 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 181-202 amino acids (not heteromeric)

CHMU_PSEAE / Q9HU05 Monofunctional chorismate mutase; EC 5.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: CM_2
185 amino acids: PaperBLAST, CDD, Compare to cluster

B2JYH9 chorismate mutase (EC 5.4.99.5) from Paraburkholderia phymatum
PFams: CM_2
182 amino acids: PaperBLAST, CDD, Compare to cluster

SCMU_MYCTU / P9WIB9 Secreted chorismate mutase; *MtCM; CM; EC 5.4.99.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIB9 chorismate mutase (EC 5.4.99.5) from Mycobacterium tuberculosis
PFams: CM_2
199 amino acids: PaperBLAST, CDD, Compare to cluster

Q2SY64 chorismate mutase (EC 5.4.99.5) from Burkholderia thailandensis
PFams: CM_2
202 amino acids: PaperBLAST, CDD, Compare to cluster

SCMU_MYCS2 / A0QU81 Secreted chorismate mutase; CM; EC 5.4.99.5 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 365-386 amino acids (not heteromeric)

C7EXK8 prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Escherichia coli
PFams: CM_2, PDT
386 amino acids: PaperBLAST, CDD, Compare to cluster

b2599 fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli K-12 substr. MG1655
P0A9J8 fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51) from Escherichia coli (strain K12)
CMPDT_ECOLI / P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Escherichia coli (strain K12)
CH_024084 P-protein; EC 4.2.1.51; EC 5.4.99.5 from Escherichia coli K12
PFams: CM_2, PDT
386 amino acids: PaperBLAST, CDD, Compare to cluster

CMPDT_PSEST / P27603 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Pseudomonas stutzeri (Pseudomonas perfectomarina)
PFams: CM_2, PDT, ACT
365 amino acids: PaperBLAST, CDD, Compare to cluster

CMPDT_BUCAI / P57472 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51 from Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
P57472 prephenate dehydratase (EC 4.2.1.51) from Buchnera aphidicola
PFams: CM_2, PDT
385 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 181-186 amino acids (not heteromeric)

CHMU_ENTAG / P42517 Monofunctional chorismate mutase; CM-F; EC 5.4.99.5 from Enterobacter agglomerans (Erwinia herbicola) (Pantoea agglomerans)
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

SCMU_YERPE / Q7CHH5 Secreted chorismate mutase; *MtCM; CM; EC 5.4.99.5 from Yersinia pestis
Q7CHH5 chorismate mutase (EC 5.4.99.5) from Yersinia pestis
PFams: CM_2
186 amino acids: PaperBLAST, CDD, Compare to cluster

CHMU_SALTM / Q93LJ4 Monofunctional chorismate mutase; EC 5.4.99.5 from Salmonella typhimurium
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 5 122-127 amino acids (not heteromeric)

AROH_BACSU / P19080 Chorismate mutase AroH; CM; EC 5.4.99.5 from Bacillus subtilis (strain 168)
P19080 chorismate mutase (EC 5.4.99.5) from Bacillus subtilis
PFams: CM_1
127 amino acids: PaperBLAST, CDD, Compare to cluster

AROH_THETH / Q84FH6 Chorismate mutase AroH; EC 5.4.99.5 from Thermus thermophilus
Q84FH6 chorismate mutase (EC 5.4.99.5) from Thermus thermophilus
PFams: CM_1
122 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 6 104-105 amino acids (not heteromeric)

CHMU_MYCTU / P9WIC1 Intracellular chorismate mutase; CM; EC 5.4.99.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIC1 chorismate mutase (EC 5.4.99.5) from Mycobacterium tuberculosis
PFams: CM_2
105 amino acids: PaperBLAST, CDD, Compare to cluster

CHMU_MYCS2 / A0R3N5 Intracellular chorismate mutase; CM; EC 5.4.99.5 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
PFams: CM_2
104 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 7 275-286 amino acids (not heteromeric)

B6C761 chorismate mutase (EC 5.4.99.5) from Globodera rostochiensis
PFams: CM_2
286 amino acids: PaperBLAST, CDD, Compare to cluster

Q3LUE0 chorismate mutase (EC 5.4.99.5) from Heterodera schachtii
PFams: CM_2
275 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/7 heteromeric)

O30012 prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus
PFams: PDH, CM_2, PDT, ACT
620 amino acids: PaperBLAST, CDD

P39912 chorismate mutase (EC 5.4.99.5) from Bacillus subtilis
PFams: CM_2, DAHP_synth_1, NeuB
358 amino acids: PaperBLAST, CDD

MBTI_MYCTU / P9WFX1 Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WFX1 isochorismate lyase (EC 4.2.99.21); isochorismate synthase (EC 5.4.4.2) from Mycobacterium tuberculosis
PFams: Chorismate_bind
450 amino acids: PaperBLAST, CDD

Q51507 isochorismate pyruvate lyase (EC 4.2.99.21) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PCHB_PSEAE / Q51507 Isochorismate pyruvate lyase; IPL; Chorismate mutase; CM; Salicylate biosynthesis protein; EC 4.2.99.21; EC 5.4.99.5 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q51507 isochorismate lyase (EC 4.2.99.21) from Pseudomonas aeruginosa
PFams: CM_2
101 amino acids: PaperBLAST, CDD

CMU1_USTMA / A0A0D1DWQ2 Secreted chorismate mutase; EC 5.4.99.5 from Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus)
290 amino acids: PaperBLAST, CDD

CHMU_METJA / Q57696 Chorismate mutase; CM; Monofunctional chorismate mutase AroQ(f); EC 5.4.99.5 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
PFams: CM_2
99 amino acids: PaperBLAST, CDD

b2600 fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli K-12 substr. MG1655
P07023 fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli (strain K12)
PFams: CM_2, PDH
373 amino acids: PaperBLAST, CDD