PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for EC 2.6.1.78 as complete word(s)

Or try another search

Found 4 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 385-479 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

PAT_ARATH / Q9SIE1 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana (Mouse-ear cress)
Q9SIE1 aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana
PFams: Aminotran_1_2, DegT_DnrJ_EryC1
475 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_THET8 / Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
RF|YP_143312.1 aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus HB8
PFams: Aminotran_1_2, DegT_DnrJ_EryC1, Aminotran_3
385 amino acids: PaperBLAST, CDD, Compare to cluster

PAT_PETHY / E9L7A5 Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida (Petunia)
PFams: Aminotran_1_2
479 amino acids: PaperBLAST, CDD, Compare to cluster

AAPAT_CHLTE / Q8KDS8 Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) (Chlorobium tepidum)
PFams: Aminotran_1_2, Cys_Met_Meta_PP, DegT_DnrJ_EryC1
400 amino acids: PaperBLAST, CDD, Compare to cluster