PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for IGP synthase, amidotransferase subunit as complete word(s)

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Found 3 characterized proteins with matching descriptions. 3 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 212-213 amino acids (heteromeric)

The first sequence in each cluster is the seed.

DVU0285 IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris Hildenborough JW710
PFams: GATase
Heteromeric, 213 amino acids: PaperBLAST, CDD, Compare to cluster

HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Herbaspirillum seropedicae SmR1
PFams: GATase
Heteromeric, 212 amino acids: PaperBLAST, CDD, Compare to cluster

DvMF_2305 IGP synthase, amidotransferase subunit (EC 4.3.2.10) from Desulfovibrio vulgaris Miyazaki F
PFams: GATase
Heteromeric, 212 amino acids: PaperBLAST, CDD, Compare to cluster