PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for carbamoyl-phosphate synthase%large as complete word(s)

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Found 2 characterized proteins with matching descriptions. 1 of these are heteromeric.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 1118-1187 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

P03965 carbamoyl phosphate synthetase (EC 6.3.5.5) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
CARB_YEAST / P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
Heteromeric, 1118 amino acids: PaperBLAST, CDD, Compare to cluster

CARB_ARATH / Q42601 Carbamoyl-phosphate synthase large chain, chloroplastic; Carbamoyl-phosphate synthetase ammonia chain; Protein VENOSA 6; EC 6.3.5.5 from Arabidopsis thaliana (Mouse-ear cress)
PFams: CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1187 amino acids: PaperBLAST, CDD, Compare to cluster