PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for isopropylmalate synthase as complete word(s)

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Found 19 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 19 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 18 of these sequences

Found 3 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 445-631 amino acids (not heteromeric)

LEU1_METJA / Q58595 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Q58595 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii
PFams: HMGL-like, LeuA_dimer
518 amino acids: PaperBLAST, CDD, Compare to cluster

K4C627 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum
PFams: HMGL-like, LeuA_dimer
612 amino acids: PaperBLAST, CDD, Compare to cluster

K4CJ56 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum
PFams: HMGL-like
445 amino acids: PaperBLAST, CDD, Compare to cluster

Q30DX9 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis
PFams: HMGL-like, LeuA_dimer
623 amino acids: PaperBLAST, CDD, Compare to cluster

LEU12_ARATH / Q9C550 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana (Mouse-ear cress)
Q9C550 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana
PFams: HMGL-like, LeuA_dimer
631 amino acids: PaperBLAST, CDD, Compare to cluster

MAM1_ARATH / Q9FG67 Methylthioalkylmalate synthase 1, chloroplastic; 2-isopropylmalate synthase 3; EC 2.3.3.17 from Arabidopsis thaliana (Mouse-ear cress)
Q9FG67 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana
Q9FG67 methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana
PFams: HMGL-like
506 amino acids: PaperBLAST, CDD, Compare to cluster

MAM3_ARATH / Q9FN52 Methylthioalkylmalate synthase 3, chloroplastic; 2-isopropylmalate synthase 2; Methylthioalkylmalate synthase-like; EC 2.3.3.17 from Arabidopsis thaliana (Mouse-ear cress)
Q9FN52 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana
Q9FN52 methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana
PFams: HMGL-like
503 amino acids: PaperBLAST, CDD, Compare to cluster

Q9JZG1 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis
PFams: HMGL-like, LeuA_dimer
517 amino acids: PaperBLAST, CDD, Compare to cluster

LEU11_ARATH / Q9LPR4 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana (Mouse-ear cress)
Q9LPR4 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana
PFams: HMGL-like, LeuA_dimer
631 amino acids: PaperBLAST, CDD, Compare to cluster

LEU1_SALTY / P15875 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: HMGL-like, LeuA_dimer
523 amino acids: PaperBLAST, CDD, Compare to cluster

b0074 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli K-12 substr. MG1655
P09151 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli (strain K12)
PFams: HMGL-like, LeuA_dimer
523 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 604-644 amino acids (not heteromeric)

P9WQB3 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis
PFams: HMGL-like, LeuA_dimer
644 amino acids: PaperBLAST, CDD, Compare to cluster

CH_124190 2-isopropylmalate synthase 2 from Magnaporthe grisea 70-15
PFams: HMGL-like, LeuA_dimer
616 amino acids: PaperBLAST, CDD, Compare to cluster

LEU1_YEAST / P06208 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: HMGL-like, LeuA_dimer
619 amino acids: PaperBLAST, CDD, Compare to cluster

LEU9_YEAST / Q12166 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: HMGL-like, LeuA_dimer
604 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 386-394 amino acids (not heteromeric)

B0SN40 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa
PFams: HMGL-like
394 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0G2T6D7 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii
PFams: HMGL-like
394 amino acids: PaperBLAST, CDD, Compare to cluster

LEU1_SULAC / Q4JA78 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: HMGL-like
386 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

LEU1_CYCRE / P85362 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Cycas revoluta (Sago palm)
9 amino acids: PaperBLAST, CDD