PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for sorbitol-6-phosphate dehydrogenase as complete word(s)

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Found 3 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 259-266 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

GI|2342569 sorbitol-6-phosphate dehydrogenase from Erwinia amylovora
PFams: adh_short, adh_short_C2
259 amino acids: PaperBLAST, CDD, Compare to cluster

b2705 sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli K-12 substr. MG1655
P05707 sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) from Escherichia coli (strain K12)
CH_091827 sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli K12
PFams: adh_short, adh_short_C2
259 amino acids: PaperBLAST, CDD, Compare to cluster

Q9X671 sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans
PFams: adh_short, Epimerase, adh_short_C2
266 amino acids: PaperBLAST, CDD, Compare to cluster