GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to argB

Finding the characterized proteins for argB (N-acylglutamate kinase) in L-arginine biosynthesis

Or see clustering for step argB

Or see all steps for L-arginine biosynthesis

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Definition of argB

Fetched 17 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 18 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

There are also 3 HMM-only high-coverage hits.

HMM-only sequences

(Since these sequences' annotations are outside the definition for argB, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

CH_123299 arginine biosynthetic enzyme activities
PFams: AA_kinase, NAT, Semialdhyde_dh
857 amino acids: PaperBLAST, CDD

Q87EL2 amino-acid N-acetyltransferase (EC 2.3.1.1)
PFams: AA_kinase, NAT
421 amino acids: PaperBLAST, CDD

O50147 [LysW]-aminoadipate kinase; EC 2.7.2.-
PFams: AA_kinase
269 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for argB.)

O67848 UDP-3-O-acyl-N-acetylglucosamine deacetylase (EC 3.5.1.108)
PFams: AA_kinase
298 amino acids: PaperBLAST, CDD, BRENDA::O67848
54% identical to

Q9HTN2 Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8
Q9HTN2 acetylglutamate kinase (EC 2.7.2.8)
PFams: AA_kinase
301 amino acids: PaperBLAST, CDD