GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to carB

Finding the characterized proteins for carB (carbamoyl phosphate synthase subunit beta) in L-arginine biosynthesis

Or see clustering for step carB

Or see all steps for L-arginine biosynthesis

Or cluster curated proteins matching a keyword

Definition of carB

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 16 other characterized sequences. (Found 19 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for carB.)

Q8RSS3 carbamoyl-phosphate synthase (glutamine-hydrolysing) (subunit 1/2) (EC 6.3.5.5)
PFams: CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, Dala_Dala_lig_C, MGS
Heteromeric, 1076 amino acids: PaperBLAST, CDD, BRENDA::Q8RSS3
72% identical to

CARBPSYN-LARGE carbamoyl phosphate synthetase subunit β (EC 6.3.5.5)
CARBPSYN-LARGE carbamoyl phosphate synthetase, β chain (EC 6.3.5.5)
P00968 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
CH_002132 carbamoyl phosphate synthase, large subunit; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, ATPgrasp_Ter, MGS
Heteromeric, 1073 amino acids: PaperBLAST, CDD

YJL130C-MONOMER carbamoyl phosphate synthase/aspartate carbamoyltransferase (EC 2.1.3.2; EC 6.3.5.5)
P07259 Protein URA2; EC 6.3.5.5; EC 2.1.3.2
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, OTCace_N, OTCace
2214 amino acids: PaperBLAST, CDD, SwissProt::P07259
55% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

CH_122562 protein pyrABCN [Includes glutamine-dependent carbamoyl-phosphate; Aspartate carbamoyltransferase]; EC 2.1.3.2; EC 6.3.5.5
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, OTCace_N, OTCace
2275 amino acids: PaperBLAST, CDD, CharProtDB::CH_122562
53% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

CH_125552 carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1; EC 2.1.3.2; EC 3.5.2.3; EC 6.3.5.5
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, OTCace_N, OTCace
2244 amino acids: PaperBLAST, CDD, CharProtDB::CH_125552
55% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

Q91437 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, ATP-grasp, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2242 amino acids: PaperBLAST, CDD, SwissProt::Q91437
53% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

P27708 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3
P27708 aspartate carbamoyltransferase (EC 2.1.3.2); dihydroorotase (EC 3.5.2.3)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2225 amino acids: PaperBLAST, CDD, BRENDA::P27708
54% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

P05990 CAD protein; Protein rudimentary; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3
PFams: CPSase_sm_chain, GATase, Peptidase_C26, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D2, MGS, Amidohydro_1, OTCace_N, OTCace
2224 amino acids: PaperBLAST, CDD, SwissProt::P05990
53% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

P08955 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3
P08955 dihydroorotase (EC 3.5.2.3)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2225 amino acids: PaperBLAST, CDD, BRENDA::P08955
54% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

O50302 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, GARS_A, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1064 amino acids: PaperBLAST, CDD, BRENDA::O50302
52% identical to

CARBPSYN-LARGE carbamoyl phosphate synthetase subunit β (EC 6.3.5.5)
CARBPSYN-LARGE carbamoyl phosphate synthetase, β chain (EC 6.3.5.5)
P00968 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
CH_002132 carbamoyl phosphate synthase, large subunit; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, ATPgrasp_Ter, MGS
Heteromeric, 1073 amino acids: PaperBLAST, CDD

B2G3Q3 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, GARS_A, ATP-grasp, Dala_Dala_lig_C, MGS
1059 amino acids: PaperBLAST, CDD, BRENDA::B2G3Q3
50% identical to

CARBPSYN-LARGE carbamoyl phosphate synthetase subunit β (EC 6.3.5.5)
CARBPSYN-LARGE carbamoyl phosphate synthetase, β chain (EC 6.3.5.5)
P00968 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
CH_002132 carbamoyl phosphate synthase, large subunit; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, ATPgrasp_Ter, MGS
Heteromeric, 1073 amino acids: PaperBLAST, CDD

Q18990 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2198 amino acids: PaperBLAST, CDD, SwissProt::Q18990
52% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

P31327 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16
P31327 carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, CPSase_C
1500 amino acids: PaperBLAST, CDD, BRENDA::P31327
51% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

P07756 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, CPSase_C
1500 amino acids: PaperBLAST, CDD, SwissProt::P07756
51% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

Q8C196 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16
Q8C196 carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, CPSase_C
1500 amino acids: PaperBLAST, CDD, BRENDA::Q8C196
51% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

O15830 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
PFams: CPSase_sm_chain, GATase, Peptidase_C26, CPSase_L_D2, CPSase_L_D3, ATP-grasp, CPSase_L_D2, Dala_Dala_lig_C
1524 amino acids: PaperBLAST, CDD, BRENDA::O15830
48% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD

O15829 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5)
PFams: CPSase_sm_chain, GATase, Peptidase_C26, CPSase_L_D2, ATP-grasp, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1520 amino acids: PaperBLAST, CDD, BRENDA::O15829
48% identical to

P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1118 amino acids: PaperBLAST, CDD