GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for gatB (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B) in L-asparagine biosynthesis

Or see other characterized proteins similar to gatB

Or see all steps for L-asparagine biosynthesis

Or cluster curated proteins matching a keyword

Definition of gatB

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 475-557 amino acids (heteromeric)

The first sequence in each cluster is the seed.

O75879 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.-
O75879 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7)
PFams: GatB_N, GatB_Yqey
Heteromeric, 557 amino acids: PaperBLAST, CDD, Compare to cluster

P33893 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112; EC 6.3.5.-
PFams: GatB_N, GatB_Yqey
Heteromeric, 541 amino acids: PaperBLAST, CDD, Compare to cluster

Q9FV81 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.-
PFams: GatB_N, GatB_Yqey
Heteromeric, 550 amino acids: PaperBLAST, CDD, Compare to cluster

Q9RF06 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Asp/Glu-ADT subunit B; EC 6.3.5.-
PFams: GatB_N, GatB_Yqey
Heteromeric, 475 amino acids: PaperBLAST, CDD, Compare to cluster

Q9UT77 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; EC 6.3.5.-
PFams: GatB_N, GatB_Yqey
Heteromeric, 526 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-13956 glutamyl-tRNAGln amidotransferase subunit B (EC 6.3.5.7)
PFams: GatB_N, GatB_Yqey
Heteromeric, 476 amino acids: PaperBLAST, CDD, Compare to cluster