Clusters of Characterized Proteins

Clustering the characterized proteins for gatB (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B) in L-asparagine biosynthesis

Or see other characterized proteins similar to gatB

Or see all steps for L-asparagine biosynthesis

Or cluster curated proteins matching a keyword

Definition of gatB

• HMM TIGR00133
• Curated proteins matching aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
• Curated proteins matching glutamyl-tRNA(Gln) amidotransferase subunit B
• Curated sequence MONOMER-13956: glutamyl-tRNA^Gln amidotransferase subunit B (EC 6.3.5.7)
• Ignore hits to items matching EC 6.3.5.7 when looking for 'other' hits

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Arabidopsis thaliana

GATB_ARATH / Q9FV81 Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Arabidopsis thaliana (Mouse-ear cress)
PFams: GatB_N, GatB_Yqey
Heteromeric, 550 amino acids: PaperBLAST, CDD (Cluster 1)

Bacillus subtilis

O30509 glutamyl-tRNA^Gln amidotransferase subunit B (EC 6.3.5.7) from Bacillus subtilis (strain 168)
PFams: GatB_N, GatB_Yqey
Heteromeric, 476 amino acids: PaperBLAST, CDD (Cluster 1)

Homo sapiens

GATB_HUMAN / O75879 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112 homolog; EC 6.3.5.- from Homo sapiens (Human)
O75879 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7) from Homo sapiens
PFams: GatB_N, GatB_Yqey
Heteromeric, 557 amino acids: PaperBLAST, CDD (Cluster 1)

Saccharomyces cerevisiae

GATB_YEAST / P33893 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; Cytochrome c oxidase assembly factor PET112; EC 6.3.5.- from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: GatB_N, GatB_Yqey
Heteromeric, 541 amino acids: PaperBLAST, CDD (Cluster 1)

Schizosaccharomyces pombe

GATB_SCHPO / Q9UT77 Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Glu-AdT subunit B; EC 6.3.5.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: GatB_N, GatB_Yqey
Heteromeric, 526 amino acids: PaperBLAST, CDD (Cluster 1)

Staphylococcus aureus

GATB_STAAU / Q9RF06 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Asp/Glu-ADT subunit B; EC 6.3.5.- from Staphylococcus aureus
PFams: GatB_N, GatB_Yqey
Heteromeric, 475 amino acids: PaperBLAST, CDD (Cluster 1)