GapMind for Amino acid biosynthesis


Clusters of Characterized Proteins

Clustering the characterized proteins for gatC (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C) in L-asparagine biosynthesis

Or see other characterized proteins similar to gatC

Or see all steps for L-asparagine biosynthesis

Or cluster curated proteins matching a keyword

Definition of gatC

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 96-100 amino acids (heteromeric)

The first sequence in each cluster is the seed.

GATC_STRP6 / Q5XAC6 Glutamyl-tRNA(Gln) amidotransferase subunit C; Glu-ADT subunit C; EC 6.3.5.- from Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
PFams: GatC
Heteromeric, 100 amino acids: PaperBLAST, CDD, Compare to cluster

O06492 glutamyl-tRNAGln amidotransferase subunit C (EC from Bacillus subtilis (strain 168)
PFams: GatC
Heteromeric, 96 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (2/2 heteromeric)

GATC_HUMAN / O43716 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Glu-AdT subunit C; Protein 15E1.2; EC 6.3.5.- from Homo sapiens (Human)
O43716 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC from Homo sapiens
PFams: GatC
Heteromeric, 136 amino acids: PaperBLAST, CDD

GATC_ARATH / F4JV80 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Glu-AdT subunit C; EC 6.3.5.- from Arabidopsis thaliana (Mouse-ear cress)
PFams: GatC
Heteromeric, 155 amino acids: PaperBLAST, CDD