GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for gatC (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C) in L-asparagine biosynthesis

Or see other characterized proteins similar to gatC

Or see all steps for L-asparagine biosynthesis

Or cluster curated proteins matching a keyword

Definition of gatC

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 96-100 amino acids (heteromeric)

The first sequence in each cluster is the seed.

Q5XAC6 Glutamyl-tRNA(Gln) amidotransferase subunit C; Glu-ADT subunit C; EC 6.3.5.-
PFams: Glu-tRNAGln
Heteromeric, 100 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-13957 glutamyl-tRNAGln amidotransferase subunit C (EC 6.3.5.7)
PFams: Glu-tRNAGln
Heteromeric, 96 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (2/2 heteromeric)

O43716 Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Glu-AdT subunit C; Protein 15E1.2; EC 6.3.5.-
O43716 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7)
PFams: Glu-tRNAGln
Heteromeric, 136 amino acids: PaperBLAST, CDD

F4JV80 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Glu-AdT subunit C; EC 6.3.5.-
PFams: Glu-tRNAGln
Heteromeric, 155 amino acids: PaperBLAST, CDD