GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to aroB

Finding the characterized proteins for aroB (3-dehydroquinate synthase) in chorismate biosynthesis

Or see clustering for step aroB

Or see all steps for chorismate biosynthesis

Or cluster curated proteins matching a keyword

Definition of aroB

Fetched 10 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 11 hits including self hits.)

There are also 1 HMM-only high-coverage hits.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for aroB.)

G0FS62 aminodehydroquinate synthase from Amycolatopsis mediterranei (strain S699)
RIFG_AMYMS / G0FS62 Putative aminodehydroquinate synthase; aDHQS; EC 4.2.3.- from Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei)
PFams: Fe-ADH_2, DHQ_synthase
351 amino acids: PaperBLAST, CDD, SwissProt::G0FS62
40% identical to

P9WPX9 3-dehydroquinate synthase (EC 4.2.3.4) from Mycobacterium tuberculosis
PFams: Fe-ADH, Fe-ADH_2, DHQ_synthase
362 amino acids: PaperBLAST, CDD

HMM-only sequences

(Since these sequences' annotations are outside the definition for aroB, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101)
EVS_ACTMD / C6WFL3 2-epi-valiolone synthase; EVS; Sedoheptulose 7-phosphate cyclase; EC 4.2.3.155 from Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / JCM 3225 / NBRC 14064 / NCIMB 13271 / NRRL B-12336 / IMRU 3971 / 101)
C6WFL3 2-epi-valiolone synthase (EC 4.2.3.155) from Actinosynnema mirum
PFams: Fe-ADH_2, DHQ_synthase
382 amino acids: PaperBLAST, CDD