GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aroC (chorismate synthase) in chorismate biosynthesis

Or see other characterized proteins similar to aroC

Or see all steps for chorismate biosynthesis

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Definition of aroC

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 361-442 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

B5AAU3 chorismate synthase (EC 4.2.3.5)
PFams: Chorismate_synt
442 amino acids: PaperBLAST, CDD, Compare to cluster

C8Z2I6 chorismate synthase (EC 4.2.3.5)
PFams: Chorismate_synt
408 amino acids: PaperBLAST, CDD, Compare to cluster

O66493 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
398 amino acids: PaperBLAST, CDD, Compare to cluster

P0A2Y6 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
388 amino acids: PaperBLAST, CDD, Compare to cluster

AROC-MONOMER chorismate synthase (EC 4.2.3.5)
P12008 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EPSP phospholyase; EC 4.2.3.5
AROC-MONOMER chorismate synthase (EC 4.2.3.5)
PFams: Chorismate_synt
361 amino acids: PaperBLAST, CDD, Compare to cluster

P28777 Chorismate synthase; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
376 amino acids: PaperBLAST, CDD, Compare to cluster

P56122 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
365 amino acids: PaperBLAST, CDD, Compare to cluster

P9WPY1 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
401 amino acids: PaperBLAST, CDD, Compare to cluster

Q59803 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5
PFams: Chorismate_synt
388 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

O15864 chorismate synthase (EC 4.2.3.5)
PFams: Chorismate_synt
527 amino acids: PaperBLAST, CDD