Clusters of Characterized Proteins

GapMind for Amino acid biosynthesis

Clusters of Characterized Proteins

Clustering the characterized proteins for tpiA (D-glyceraldehyde-3-phosphate phospholyase) in chorismate biosynthesis

Or see other characterized proteins similar to tpiA

Or see all steps for chorismate biosynthesis

Or cluster curated proteins matching a keyword

Definition of tpiA

Curated proteins or TIGRFams with EC 5.3.1.1
Comment: The triose-phosphate isomerase tpiA is also thought to convert D-glyceraldehyde 3-phosphate to enolaldehyde, which spontaneously converts to methylglyoxal. (Alternatively, methylglyoxal might be formed by methylgyoxal synthase, EC 4.2.3.3?)

Fetched 47 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 45 of these sequences

Found 2 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Organism unknown

A8B3A8 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
249 amino acids: PaperBLAST, CDD (Cluster 1)

B6YUE5 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM, ThiG
226 amino acids: PaperBLAST, CDD (Cluster 2)

G0XRK4 tetrahydroberberine oxidase (EC 1.3.3.8) (low-coverage HMM hit)
PFams: TIM
232 amino acids: PaperBLAST, CDD (Cluster 1)

O02611 triose-phosphate isomerase (EC 5.3.1.1)
CH_024048 triosephosphate isomerase; EC 5.3.1.1
PFams: TIM
261 amino acids: PaperBLAST, CDD (Cluster 1)

O74025 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
O74025 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
226 amino acids: PaperBLAST, CDD (Cluster 2)

P00939 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P00939 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

P00940 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P00940 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

P00942 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P00942 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

P00943 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P00943 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
253 amino acids: PaperBLAST, CDD (Cluster 1)

P04789 Triosephosphate isomerase, glycosomal; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P04789 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
250 amino acids: PaperBLAST, CDD (Cluster 1)

TPI-MONOMER triose-phosphate isomerase (EC 5.3.1.1)
B1XB85 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P0A858 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P0A858 triose-phosphate isomerase (EC 5.3.1.1)
CH_024675 triose-phosphate isomerase
PFams: TIM
255 amino acids: PaperBLAST, CDD (Cluster 1)

P35144 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
251 amino acids: PaperBLAST, CDD (Cluster 1)

P36186 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
257 amino acids: PaperBLAST, CDD (Cluster 1)

P36204 Bifunctional PGK/TIM; EC 2.7.2.3; EC 5.3.1.1
P36204 triose-phosphate isomerase (EC 5.3.1.1)
MONOMER-382 Pgk (EC 2.7.2.3; EC 5.3.1.1)
PFams: PGK, TIM
654 amino acids: PaperBLAST, CDD (Singleton 1)

P48491 Triosephosphate isomerase, cytosolic; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P48491 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
254 amino acids: PaperBLAST, CDD (Cluster 1)

P48499 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P48499 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
251 amino acids: PaperBLAST, CDD (Cluster 1)

P50921 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P50921 triose-phosphate isomerase (EC 5.3.1.1)
CH_007872 triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
256 amino acids: PaperBLAST, CDD (Cluster 1)

P52270 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
251 amino acids: PaperBLAST, CDD (Cluster 1)

P56076 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P56076 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
234 amino acids: PaperBLAST, CDD (Cluster 1)

P60174 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
P60174 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
286 amino acids: PaperBLAST, CDD (Cluster 1)

P62003 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P62002 triose-phosphate isomerase (EC 5.3.1.1)
P62003 triose-phosphate isomerase (EC 5.3.1.1)
MONOMER-11811 triose phosphate isomerase subunit (EC 5.3.1.1)
PFams: TIM, ThiG
228 amino acids: PaperBLAST, CDD (Cluster 2)

P9WG43 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
P9WG43 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
261 amino acids: PaperBLAST, CDD (Cluster 1)

Q07412 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
Q07412 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

Q0H294 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
253 amino acids: PaperBLAST, CDD (Cluster 1)

Q0ZAG6 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
252 amino acids: PaperBLAST, CDD (Cluster 1)

Q10657 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
247 amino acids: PaperBLAST, CDD (Cluster 1)

Q58923 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
Q58923 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
219 amino acids: PaperBLAST, CDD (Cluster 2)

Q5CSE7 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
250 amino acids: PaperBLAST, CDD (Cluster 1)

Q5S7Y5 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
282 amino acids: PaperBLAST, CDD (Cluster 1)

Q6GIL6 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
Q6GIL6 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
253 amino acids: PaperBLAST, CDD (Cluster 1)

Q7X216 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
265 amino acids: PaperBLAST, CDD (Cluster 1)

Q8L1Z5 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
Q8L1Z5 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
254 amino acids: PaperBLAST, CDD (Cluster 1)

Q8MPF2 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
247 amino acids: PaperBLAST, CDD (Cluster 1)

Q8NKN9 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
Q8NKN9 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM, ThiG
226 amino acids: PaperBLAST, CDD (Cluster 2)

Q97VM8 triose-phosphate isomerase (EC 5.3.1.1)
PFams: TIM
227 amino acids: PaperBLAST, CDD (Cluster 2)

CH_091809 triosephosphate isomerase; EC 5.3.1.1
PFams: TIM
261 amino acids: PaperBLAST, CDD (Cluster 1)

Q9P940 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
CH_123340 triosephosphate isomerase (TIM); EC 5.3.1.1
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

CH_125123 triosephosphate isomerase; EC 5.3.1.1
PFams: TIM
249 amino acids: PaperBLAST, CDD (Cluster 1)

P29613 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
247 amino acids: PaperBLAST, CDD (Cluster 1)

P85814 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; Allergen Pla o 4; EC 5.3.1.1
PFams: TIM, TIM
86 amino acids: PaperBLAST, CDD (Singleton 2)

Q4MQ55 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
251 amino acids: PaperBLAST, CDD (Cluster 1)

Q5SJR1 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
250 amino acids: PaperBLAST, CDD (Cluster 1)

Q8XKU1 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
248 amino acids: PaperBLAST, CDD (Cluster 1)

Q92EU4 Triosephosphate isomerase 2; TIM 2; TPI 2; Triose-phosphate isomerase 2; EC 5.3.1.1
PFams: TIM
254 amino acids: PaperBLAST, CDD (Cluster 1)

Q96VN5 Triosephosphate isomerase; TIM; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
249 amino acids: PaperBLAST, CDD (Cluster 1)

Q9RUP5 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
244 amino acids: PaperBLAST, CDD (Cluster 1)

Q9Z520 Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1
PFams: TIM
258 amino acids: PaperBLAST, CDD (Cluster 1)