GapMind for Amino acid biosynthesis


Clusters of Characterized Proteins

Clustering the characterized proteins for sepS (O-phosphoseryl-tRNA ligase) in L-cysteine biosynthesis

Or see other characterized proteins similar to sepS

Or see all steps for L-cysteine biosynthesis

Or cluster curated proteins matching a keyword

Definition of sepS

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 534-539 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

O30126 O-phospho-L-serine-tRNA ligase (EC
PFams: tRNA_synthFbeta, tRNA-synt_2d, SepRS_C
534 amino acids: PaperBLAST, CDD, Compare to cluster

Q59054 O-phosphoserine--tRNA(Cys) ligase; O-phosphoserine--tRNA ligase; Non-canonical O-phosphoseryl-tRNA(Cys) synthetase; O-phosphoseryl-tRNA(Cys) synthetase; SepRS; EC
PFams: tRNA-synt_2d, tRNA_synthFbeta, SepRS_C
539 amino acids: PaperBLAST, CDD, Compare to cluster