GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for agx1 (alanine--glyoxylate aminotransferase) in glycine biosynthesis

Or see other characterized proteins similar to agx1

Or see all steps for glycine biosynthesis

Or cluster curated proteins matching a keyword

Definition of agx1

Fetched 14 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 10 of these sequences

Found 3 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 476-514 amino acids (not heteromeric)

Q3UEG6 Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-AIBAT; EC 2.6.1.44; EC 2.6.1.40
Q3UEG6 alanine-glyoxylate transaminase (EC 2.6.1.44)
PFams: Aminotran_3
513 amino acids: PaperBLAST, CDD, Compare to cluster

Q64565 (R)-3-amino-2-methylpropionate-pyruvate transaminase (EC 2.6.1.40); alanine-glyoxylate transaminase (EC 2.6.1.44)
PFams: Aminotran_3
512 amino acids: PaperBLAST, CDD, Compare to cluster

Q940M2 Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Beta-alanine-pyruvate aminotransferase 1; EC 2.6.1.44
PFams: Aminotran_3
476 amino acids: PaperBLAST, CDD, Compare to cluster

Q94AL9 Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial; Beta-alanine-pyruvate aminotransferase 2; EC 2.6.1.44
PFams: Aminotran_3
477 amino acids: PaperBLAST, CDD, Compare to cluster

Q9BYV1 Alanine--glyoxylate aminotransferase 2, mitochondrial; AGT 2; (R)-3-amino-2-methylpropionate--pyruvate transaminase; Beta-ALAAT II; Beta-alanine-pyruvate aminotransferase; D-AIBAT; EC 2.6.1.44; EC 2.6.1.40
PFams: Aminotran_3
514 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 392-401 amino acids (not heteromeric)

A2V838 alanine-glyoxylate transaminase (EC 2.6.1.44)
PFams: Aminotran_5
392 amino acids: PaperBLAST, CDD, Compare to cluster

P21549 Serine--pyruvate aminotransferase; SPT; Alanine--glyoxylate aminotransferase; AGT; EC 2.6.1.51; EC 2.6.1.44
P21549 alanine-glyoxylate transaminase (EC 2.6.1.44)
PFams: Aminotran_5
392 amino acids: PaperBLAST, CDD, Compare to cluster

AT2G13360-MONOMER serine:glyoxylate aminotransferase (EC 2.6.1.45)
Q56YA5 Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51
Q56YA5 alanine-glyoxylate transaminase (EC 2.6.1.44); serine-glyoxylate transaminase (EC 2.6.1.45)
PFams: Aminotran_5
401 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 481-481 amino acids (not heteromeric)

AT1G23310-MONOMER alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4)
Q9LR30 Glutamate--glyoxylate aminotransferase 1; AtGGT2; Alanine aminotransferase GGT1; Alanine--glyoxylate aminotransferase GGT1; Alanine-2-oxoglutarate aminotransferase 1; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.-
Q9LR30 gamma-glutamyltransferase (EC 2.3.2.2)
PFams: Aminotran_1_2
481 amino acids: PaperBLAST, CDD, Compare to cluster

AT1G70580-MONOMER alanine transaminase (EC 2.6.1.44; EC 2.6.1.2; EC 2.6.1.4)
Q9S7E9 Glutamate--glyoxylate aminotransferase 2; AtGGT2; Alanine aminotransferase GGT2; Alanine--glyoxylate aminotransferase GGT2; Alanine-2-oxoglutarate aminotransferase 2; EC 2.6.1.4; EC 2.6.1.2; EC 2.6.1.44; EC 2.6.1.-
PFams: Aminotran_1_2
481 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/4 heteromeric)

D2Z0I0 alanine-glyoxylate transaminase (EC 2.6.1.44)
PFams: Aminotran_1_2
402 amino acids: PaperBLAST, CDD

P43567 Alanine--glyoxylate aminotransferase 1; EC 2.6.1.44
PFams: Aminotran_5
385 amino acids: PaperBLAST, CDD

P84187 Serine--glyoxylate aminotransferase; SGAT; Alanine--glyoxylate aminotransferase; AGT; EC 2.6.1.45; EC 2.6.1.44
136 amino acids: PaperBLAST, CDD

P84188 Serine--glyoxylate aminotransferase; SGAT; Alanine--glyoxylate aminotransferase; AGT; EC 2.6.1.45; EC 2.6.1.44
78 amino acids: PaperBLAST, CDD