GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for gly1 (L-threonine aldolase) in glycine biosynthesis

Or see other characterized proteins similar to gly1

Or see all steps for glycine biosynthesis

Or cluster curated proteins matching a keyword

Definition of gly1

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 3 clusters of similar sequences. Download as table or as draft rules or view by cluster

Organism unknown

A0T1V9 low-specificity L-threonine aldolase (EC 4.1.2.48)
PFams: Beta_elim_lyase
348 amino acids: PaperBLAST, CDD (Cluster 2)

O13427 low-specificity L-threonine aldolase (EC 4.1.2.48)
PFams: Beta_elim_lyase, Aminotran_1_2
374 amino acids: PaperBLAST, CDD (Cluster 1)

O50584 low-specificity L-threonine aldolase (EC 4.1.2.48)
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD (Cluster 2)

GLYOHMETRANS-MONOMER serine hydroxymethyltransferase (EC 2.1.2.1)
GLYOHMETRANS-MONOMER serine hydroxymethyltransferase (EC 2.1.2.1)
P0A825 Serine hydroxymethyltransferase; SHMT; Serine methylase; EC 2.1.2.1
P0A825 glycine hydroxymethyltransferase (EC 2.1.2.1); low-specificity L-threonine aldolase (EC 4.1.2.48)
CH_024268 serine hydroxymethyltransferase; EC 2.1.2.1
PFams: SHMT, Aminotran_5, Beta_elim_lyase, Aminotran_1_2
417 amino acids: PaperBLAST, CDD (Cluster 3)

P37303 Low specificity L-threonine aldolase; Low specificity L-TA; TA; EC 4.1.2.48
P37303 low-specificity L-threonine aldolase (EC 4.1.2.48)
PFams: Beta_elim_lyase
387 amino acids: PaperBLAST, CDD (Cluster 1)

LTAA-MONOMER low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.5; EC 4.1.2.26; EC 4.1.2.49)
LTAA-MONOMER low-specificity L-threonine aldolase (EC 4.1.2.48; EC 4.1.2.26)
P75823 Low specificity L-threonine aldolase; Low specificity L-TA; EC 4.1.2.48
P75823 low-specificity L-threonine aldolase (EC 4.1.2.48)
CH_002549 threonine aldolase; EC 4.1.2.5
PFams: Beta_elim_lyase, Aminotran_1_2
333 amino acids: PaperBLAST, CDD (Cluster 1)

CH_090824 threonine aldolase; EC 4.1.2.5
PFams: Beta_elim_lyase
387 amino acids: PaperBLAST, CDD (Cluster 1)

D3DKC4 Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48
PFams: SHMT, Beta_elim_lyase, Aminotran_1_2
427 amino acids: PaperBLAST, CDD (Cluster 3)

Q8RXU4 Probable low-specificity L-threonine aldolase 1; Threonine aldolase 1; EC 4.1.2.48
PFams: Beta_elim_lyase, Aminotran_1_2, DegT_DnrJ_EryC1, Cys_Met_Meta_PP
358 amino acids: PaperBLAST, CDD (Cluster 1)

Q9FPH3 Probable low-specificity L-threonine aldolase 2; Threonine aldolase 2; EC 4.1.2.48
PFams: Beta_elim_lyase, Aminotran_1_2
355 amino acids: PaperBLAST, CDD (Cluster 1)

pseudo13_GW456_L13:PfGW456L13_1114 L-threonine aldolase (EC 4.1.2.5)
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD (Cluster 2)

pseudo3_N2E3:AO353_07670 L-threonine aldolase (EC 4.1.2.5)
PFams: Beta_elim_lyase
346 amino acids: PaperBLAST, CDD (Cluster 2)