Other Characterized Proteins Similar to glyA

Finding the characterized proteins for glyA (serine hydroxymethyltransferase) in glycine biosynthesis

Or see clustering for step glyA

Or see all steps for glycine biosynthesis

Or cluster curated proteins matching a keyword

Definition of glyA

• Curated proteins or TIGRFams with EC 2.1.2.1
• Curated proteins matching Serine hydroxymethyltransferase
• Comment: Some methanogens use tetrahydromethanopterin instead of tetrahydrofolate as the folate carrier, which is annotated as "Serine hydroxymethyltransferase" but with a different EC number.

Fetched 52 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 3 other characterized sequences. (Found 55 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for glyA.)

MSHMT_AMISX / B2DEU8 2-methylserine hydroxymethyltransferase; MSHMT; AHMT; Alpha-methylserine hydroxymethyltransferase; D-alanine 2-hydroxymethyltransferase; EC 2.1.2.7 from Aminobacter sp.
B2DEU8 D-alanine 2-hydroxymethyltransferase (EC 2.1.2.7) from Aminobacter sp. AJ110403
PFams: SHMT, Beta_elim_lyase, Aminotran_1_2, DegT_DnrJ_EryC1
425 amino acids: PaperBLAST, CDD, SwissProt::B2DEU8
56% identical to

P34895 serine hydroxymethyltransferase subunit (EC 2.1.2.1) from Hyphomicrobium methylovorum
PFams: SHMT, DegT_DnrJ_EryC1
434 amino acids: PaperBLAST, CDD

MSHMT_PARSX / B2DEU7 2-methylserine hydroxymethyltransferase; MSHMT; Alpha-methylserine hydroxymethyltransferase; D-alanine 2-hydroxymethyltransferase; EC 2.1.2.7 from Paracoccus sp.
PFams: SHMT, Beta_elim_lyase, Aminotran_1_2, Cys_Met_Meta_PP
425 amino acids: PaperBLAST, CDD, SwissProt::B2DEU7
56% identical to

P34895 serine hydroxymethyltransferase subunit (EC 2.1.2.1) from Hyphomicrobium methylovorum
PFams: SHMT, DegT_DnrJ_EryC1
434 amino acids: PaperBLAST, CDD

MSHMT_ENSSX / B2DEV1 2-methylserine hydroxymethyltransferase; MSHMT; Alpha-methylserine hydroxymethyltransferase; D-alanine 2-hydroxymethyltransferase; EHMT; EC 2.1.2.7 from Ensifer sp.
B2DEV1 D-alanine 2-hydroxymethyltransferase (EC 2.1.2.7) from Ensifer sp. AJ110404
PFams: SHMT, Beta_elim_lyase, Aminotran_1_2
425 amino acids: PaperBLAST, CDD, SwissProt::B2DEV1
55% identical to

P34895 serine hydroxymethyltransferase subunit (EC 2.1.2.1) from Hyphomicrobium methylovorum
PFams: SHMT, DegT_DnrJ_EryC1
434 amino acids: PaperBLAST, CDD