GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hisA (isomerase HisA) in L-histidine biosynthesis

Or see other characterized proteins similar to hisA

Or see all steps for L-histidine biosynthesis

Or cluster curated proteins matching a keyword

Definition of hisA

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 2 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 261-304 amino acids (not heteromeric)

Q5TKS8 1-(5-phosphoribosyl)-5-[(5 phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (EC 5.3.1.16)
PFams: His_biosynth
304 amino acids: PaperBLAST, CDD, Compare to cluster

P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; 5-proFAR isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16
PFams: His_biosynth
261 amino acids: PaperBLAST, CDD, Compare to cluster

AT2G36230-MONOMER phosphoribosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide isomerase (EC 5.3.1.16)
PFams: His_biosynth
304 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 240-245 amino acids (not heteromeric)

P16250 Phosphoribosyl isomerase A; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; N-(5'-phosphoribosyl)anthranilate isomerase; PRAI; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16; EC 5.3.1.24
P16250 phosphoribosylanthranilate isomerase (EC 5.3.1.24)
PFams: His_biosynth
240 amino acids: PaperBLAST, CDD, Compare to cluster

PRIBFAICARPISOM-MONOMER 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (EC 5.3.1.16)
PRIBFAICARPISOM-MONOMER N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase (EC 5.3.1.16)
PFams: His_biosynth, Trp_syntA
245 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q9X0C7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; EC 5.3.1.16
PFams: His_biosynth
241 amino acids: PaperBLAST, CDD