GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hisD (histidinal/histidinol dehydrogenase) in L-histidine biosynthesis

Or see other characterized proteins similar to hisD

Or see all steps for L-histidine biosynthesis

Or cluster curated proteins matching a keyword

Definition of hisD

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 2 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 430-478 amino acids (not heteromeric)

G7IKX3 histidinol dehydrogenase (EC 1.1.1.23) from Medicago truncatula
PFams: Histidinol_dh
478 amino acids: PaperBLAST, CDD, Compare to cluster

Q8G2R2 histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis bv. 1
PFams: Histidinol_dh
430 amino acids: PaperBLAST, CDD, Compare to cluster

RF|NP_595886.1 histidinol dehydrogenase His2 (predicted); EC 1.1.1.23 from Schizosaccharomyces pombe
PFams: Histidinol_dh
439 amino acids: PaperBLAST, CDD, Compare to cluster

b2020 histidinal/histidinol dehydrogenase from Escherichia coli K-12 substr. MG1655
P06988 histidinal/histidinol dehydrogenase (EC 1.1.1.23) from Escherichia coli (strain K12)
HISX_ECOLI / P06988 Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli (strain K12)
PFams: Histidinol_dh
434 amino acids: PaperBLAST, CDD, Compare to cluster

HISX_SALTY / P10370 Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: Histidinol_dh
434 amino acids: PaperBLAST, CDD, Compare to cluster

HISX_MYCTU / P9WNW9 Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNW9 histidinol dehydrogenase (EC 1.1.1.23) from Mycobacterium tuberculosis
PFams: Histidinol_dh
444 amino acids: PaperBLAST, CDD, Compare to cluster

Q46N53 sulfopropanediol 3-dehydrogenase monomer (EC 1.1.1.308) (from HMM only) from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
HPSN_CUPPJ / Q46N53 Sulfopropanediol 3-dehydrogenase; 2,3-dihydroxypropane-1-sulfonate 3-dehydrogenase (sulfolactate forming); DHPS 3-dehydrogenase (sulfolactate forming); EC 1.1.1.308 from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Cupriavidus necator (strain JMP 134))
Q46N53 sulfopropanediol 3-dehydrogenase (EC 1.1.1.308) from Cupriavidus pinatubonensis
PFams: Histidinol_dh
436 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 799-844 amino acids (not heteromeric)

A1BPP9 histidinol dehydrogenase (EC 1.1.1.23) from Geotrichum candidum
PFams: PRA-CH, PRA-PH, Histidinol_dh
844 amino acids: PaperBLAST, CDD, Compare to cluster

HIS2_YEAST / P00815 Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: PRA-CH, PRA-PH, Histidinol_dh
799 amino acids: PaperBLAST, CDD, Compare to cluster