GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to hisF

Finding the characterized proteins for hisF (IGP synthase, cyclase subunit) in L-histidine biosynthesis

Or see clustering for step hisF

Or see all steps for L-histidine biosynthesis

Or cluster curated proteins matching a keyword

Definition of hisF

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 5 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

There are also 1 HMM-only high-coverage hits.

HMM-only sequences

(Since these sequences' annotations are outside the definition for hisF, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

AT4G26900-MONOMER imidazole-glycerol-phosphate synthase
PFams: GATase, SNO, GATase_3, His_biosynth
592 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for hisF.)

P33734 Imidazole glycerol phosphate synthase hisHF; IGP synthase; IGPS; ImGP synthase; EC 4.3.2.10; EC 3.5.1.2
PFams: GATase, GATase_3, His_biosynth
552 amino acids: PaperBLAST, CDD, SwissProt::P33734
51% identical to

AT4G26900-MONOMER imidazole-glycerol-phosphate synthase
PFams: GATase, SNO, GATase_3, His_biosynth
592 amino acids: PaperBLAST, CDD