GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for prs (ribose-phosphate diphosphokinase) in L-histidine biosynthesis

Or see other characterized proteins similar to prs

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Definition of prs

Fetched 22 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 21 of these sequences

Found 2 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 280-336 amino acids (not heteromeric)

E7EAU9 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
317 amino acids: PaperBLAST, CDD, Compare to cluster

A3MV85 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
297 amino acids: PaperBLAST, CDD, Compare to cluster

H9D1K2 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
336 amino acids: PaperBLAST, CDD, Compare to cluster

PRPPSYN-MONOMER ribose-phosphate diphosphokinase (EC 2.7.6.1)
P0A717 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
P0A717 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PRPPSYN-MONOMER ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
315 amino acids: PaperBLAST, CDD, Compare to cluster

P60891 Ribose-phosphate pyrophosphokinase 1; PPRibP; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1
Q9D7G0 Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase I; PRS-I; EC 2.7.6.1
P60891 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
318 amino acids: PaperBLAST, CDD, Compare to cluster

Q58761 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
Q58761 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
284 amino acids: PaperBLAST, CDD, Compare to cluster

Q97Z86 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
291 amino acids: PaperBLAST, CDD, Compare to cluster

CH_123475 ribose-phosphate pyrophosphokinase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
320 amino acids: PaperBLAST, CDD, Compare to cluster

O52958 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
280 amino acids: PaperBLAST, CDD, Compare to cluster

O94413 Ribose-phosphate pyrophosphokinase 2; Phosphoribosyl pyrophosphate synthase 2; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
321 amino acids: PaperBLAST, CDD, Compare to cluster

P0A1V6 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
315 amino acids: PaperBLAST, CDD, Compare to cluster

P14193 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PPRibP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
317 amino acids: PaperBLAST, CDD, Compare to cluster

P38063 Ribose-phosphate pyrophosphokinase 4; Phosphoribosyl pyrophosphate synthase 4; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
326 amino acids: PaperBLAST, CDD, Compare to cluster

P38620 Ribose-phosphate pyrophosphokinase 2; Phosphoribosyl pyrophosphate synthase 2; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
318 amino acids: PaperBLAST, CDD, Compare to cluster

P38689 Ribose-phosphate pyrophosphokinase 3; Phosphoribosyl pyrophosphate synthase 3; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
320 amino acids: PaperBLAST, CDD, Compare to cluster

P47304 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
332 amino acids: PaperBLAST, CDD, Compare to cluster

P9WKE3 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
326 amino acids: PaperBLAST, CDD, Compare to cluster

Q5XC85 Putative ribose-phosphate pyrophosphokinase 2; RPPK 2; 5-phospho-D-ribosyl alpha-1-diphosphate 2; Phosphoribosyl diphosphate synthase 2; Phosphoribosyl pyrophosphate synthase 2; P-Rib-PP synthase 2; PRPP synthase 2; PRPPase 2; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
326 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 409-427 amino acids (not heteromeric)

P32895 Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase 1; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyl_synth
427 amino acids: PaperBLAST, CDD, Compare to cluster

P41831 Ribose-phosphate pyrophosphokinase 1; Phosphoribosyl pyrophosphate synthase 1; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
409 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

Q97CA5 Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1
Q97CA5 ribose-phosphate diphosphokinase (EC 2.7.6.1)
PFams: Pribosyltran_N, Pribosyltran, Pribosyl_synth
286 amino acids: PaperBLAST, CDD
(similar to BRENDA::A3MV85 from Cluster 1, but similarity to seed sequence is below thresholds)

Q12265 Ribose-phosphate pyrophosphokinase 5; Phosphoribosyl pyrophosphate synthase 5; EC 2.7.6.1
PFams: Pribosyltran_N, Pribosyl_synth, Pribosyltran
496 amino acids: PaperBLAST, CDD