Clustering the characterized proteins for cimA ((R)-citramalate synthase) in L-isoleucine biosynthesis
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Definition of cimA
Fetched 5 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences
Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism
Q58787 (R)-citramalate synthase CimA; EC 2.3.1.182
PFams: HMGL-like, LeuA_dimer
491 amino acids: PaperBLAST, CDD, Compare to cluster
B0K6M2 (R)-citramalate synthase (EC 2.3.1.182)
PFams: HMGL-like, LeuA_dimer
520 amino acids: PaperBLAST, CDD, Compare to cluster
D4GSQ2 2-isopropylmalate synthase / (R)-citramalatesynthase; EC=2.3.1.182; EC=2.3.3.13
512 amino acids: PaperBLAST, CDD, Compare to cluster
Q8F3Q1_LEPIN (R)-citramalate synthase CimA; EC=2.3.1.182 {ECO:0000269|PubMed:15292141, ECO:0000269|PubMed:18498255, ECO:0000269|PubMed:19351325}; LiCMS {ECO:0000303|PubMed:18498255}
516 amino acids: PaperBLAST, CDD, Compare to cluster
Q74C76 (R)-citramalate synthase; Citramalate synthase; EC 2.3.1.182
Q74C76 (R)-citramalate synthase (EC 2.3.1.182)
PFams: HMGL-like, LeuA_dimer
528 amino acids: PaperBLAST, CDD
(similar to BRENDA::B0K6M2 from Cluster 1, but similarity to seed sequence is below thresholds)