GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for ilvA (threonine deaminase) in L-isoleucine biosynthesis

Or see other characterized proteins similar to ilvA

Or see all steps for L-isoleucine biosynthesis

Or cluster curated proteins matching a keyword

Definition of ilvA

Fetched 16 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 15 of these sequences

Found 3 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 329-423 amino acids (not heteromeric)

Q74FW6 L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17
Q74FW6 threonine ammonia-lyase (EC 4.3.1.19)
PFams: PALP, ACT_4
402 amino acids: PaperBLAST, CDD, Compare to cluster

B1N2N4 L-serine ammonia-lyase (EC 4.3.1.17) (from HMM only)
PFams: PALP
423 amino acids: PaperBLAST, CDD, Compare to cluster

Q2V0H1 serine racemase (EC 5.1.1.18) (from HMM only)
PFams: PALP, ACT
402 amino acids: PaperBLAST, CDD, Compare to cluster

Q96GA7 Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17
Q96GA7 L-serine ammonia-lyase (EC 4.3.1.17)
PFams: PALP
329 amino acids: PaperBLAST, CDD, Compare to cluster

THREDEHYDCAT-MONOMER catabolic threonine dehydratase (EC 4.3.1.17; EC 4.3.1.19)
P0AGF6 L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17
CH_024588 threonine ammonia-lyase; EC 4.3.1.19
PFams: PALP
329 amino acids: PaperBLAST, CDD, Compare to cluster

P11954 L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17
PFams: PALP
329 amino acids: PaperBLAST, CDD, Compare to cluster

Q8R238 Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19
PFams: PALP
329 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 514-606 amino acids (not heteromeric)

THREDEHYDSYN-MONOMER threonine deaminase (EC 4.3.1.19)
P04968 L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
514 amino acids: PaperBLAST, CDD, Compare to cluster

Q9AXU4 threonine ammonia-lyase (EC 4.3.1.19)
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
601 amino acids: PaperBLAST, CDD, Compare to cluster

A0FKE6 Threonine dehydratase 1 biosynthetic, chloroplastic; SlTD1; Threonine deaminase 1; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
606 amino acids: PaperBLAST, CDD, Compare to cluster

O94634 Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
600 amino acids: PaperBLAST, CDD, Compare to cluster

P00927 Threonine dehydratase, mitochondrial; Threonine deaminase; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
576 amino acids: PaperBLAST, CDD, Compare to cluster

P25306 Threonine dehydratase 2 biosynthetic, chloroplastic; SlTD2; Threonine deaminase 2; EC 4.3.1.17; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
595 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 328-360 amino acids (not heteromeric)

P20132 L-serine dehydratase/L-threonine deaminase; SDH; L-serine deaminase; L-threonine dehydratase; TDH; EC 4.3.1.17; EC 4.3.1.19
P20132 L-serine ammonia-lyase (EC 4.3.1.17)
PFams: PALP
328 amino acids: PaperBLAST, CDD, Compare to cluster

P25379 Catabolic L-serine/threonine dehydratase; EC 4.3.1.17; EC 4.3.1.19
PFams: PALP
360 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

P31212 Threonine dehydratase biosynthetic, chloroplastic; Threonine deaminase; EC 4.3.1.19
PFams: PALP, Thr_dehydrat_C, Thr_dehydrat_C
359 amino acids: PaperBLAST, CDD