Clustering the characterized proteins for leuD (citramalate isomerase small subunit) in L-isoleucine biosynthesis
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Definition of leuD
Fetched 13 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 13 of these sequences
Found 3 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism
Q58673 Isopropylmalate/citramalate isomerase small subunit; (R)-2-methylmalate dehydratase; (R)-citramalate dehydratase; 3-isopropylmalate dehydratase; Alpha-isopropylmalate dehydratase; Citraconate hydratase; Isopropylmalate isomerase; IPMI; Maleate hydratase; Malease; EC 4.2.1.33; EC 4.2.1.35; EC 4.2.1.31
Q58673 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase_C
Heteromeric, 168 amino acids: PaperBLAST, CDD, Compare to cluster
P04787 3-isopropylmalate dehydratase small subunit 1; Alpha-IPM isomerase 1; IPMI 1; Isopropylmalate isomerase 1; EC 4.2.1.33
PFams: Aconitase_C
Heteromeric, 201 amino acids: PaperBLAST, CDD, Compare to cluster
Q58667 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114 (from HMM only)
PFams: Aconitase_2_N, Aconitase_C
Heteromeric, 170 amino acids: PaperBLAST, CDD, Compare to cluster
Q8NQV7 3-isopropylmalate dehydratase small subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33
PFams: Aconitase_C
Heteromeric, 197 amino acids: PaperBLAST, CDD, Compare to cluster
Q9ZND9 Homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.36 (from HMM only)
PFams: Aconitase_C
Heteromeric, 163 amino acids: PaperBLAST, CDD, Compare to cluster
LEUD-MONOMER 3-isopropylmalate dehydratase subunit LeuD (EC 4.2.1.33)
LEUD-MONOMER LeuD
PFams: Aconitase_C
Heteromeric, 201 amino acids: PaperBLAST, CDD, Compare to cluster
Q9LYT7 3-isopropylmalate dehydratase small subunit 2; AtLEUD2; Isopropylmalate isomerase small subunit 1; EC 4.2.1.33
Q9LYT7 2-(omega-methylthio)alkylmalate dehydratase (subunit 1/2) (EC 4.2.1.170); 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase_C
Heteromeric, 253 amino acids: PaperBLAST, CDD, Compare to cluster
Q9ZW84 3-isopropylmalate dehydratase small subunit 1; AtLEUD1; Isopropylmalate isomerase small subunit 2; EC 4.2.1.33
Q9ZW84 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase_C
Heteromeric, 256 amino acids: PaperBLAST, CDD, Compare to cluster
Q9ZW85 3-isopropylmalate dehydratase small subunit 3; AtLEUD3; Isopropylmalate isomerase small subunit 3; EC 4.2.1.33
Q9ZW85 2-(omega-methylthio)alkylmalate dehydratase (subunit 1/2) (EC 4.2.1.170); 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase_C
Heteromeric, 251 amino acids: PaperBLAST, CDD, Compare to cluster
C9K7B9 Aconitase AMT8; AM-toxin biosynthesis protein 8; EC 4.2.1.- (from HMM only)
PFams: Aconitase, Aconitase, Aconitase_C
840 amino acids: PaperBLAST, CDD, Compare to cluster
C9K7I3 Aconitase AMT8-2; AM-toxin biosynthesis protein 8-2; EC 4.2.1.- (from HMM only)
PFams: Aconitase, Aconitase, Aconitase_C
843 amino acids: PaperBLAST, CDD, Compare to cluster
Q4WBR0 Putative aconitate hydratase; Aconitase 3; EC 4.2.1.- (from HMM only)
PFams: Aconitase, Aconitase_C
811 amino acids: PaperBLAST, CDD, Compare to cluster
P65278 3-isopropylmalate dehydratase small subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33
P9WK95 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase_C
Heteromeric, 198 amino acids: PaperBLAST, CDD
(similar to SwissProt::P04787 from Cluster 1, but similarity to seed sequence is below thresholds)