Clusters of Characterized Proteins

GapMind for Amino acid biosynthesis

Clusters of Characterized Proteins

Clustering the characterized proteins for ofob (2-oxobutanoate:ferredoxin oxidoreductase, beta subunit) in L-isoleucine biosynthesis

Or see other characterized proteins similar to ofob

Or see all steps for L-isoleucine biosynthesis

Or cluster curated proteins matching a keyword

Definition of ofob

UniProt sequence OFOB1_SULTO: RecName: Full=2-oxoacid:ferredoxin oxidoreductase 1, subunit beta {ECO:0000303|PubMed:27619895}; Short=OFOR1 {ECO:0000303|PubMed:27619895}; EC=1.2.7.11 {ECO:0000269|PubMed:27619895, ECO:0000305|PubMed:19027887};
UniProt sequence OFOB_SULSP: RecName: Full=2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000303|PubMed:8902625}; Short=OFOR {ECO:0000303|PubMed:11683888}; EC=1.2.7.11 {ECO:0000269|PubMed:11683888, ECO:0000269|PubMed:12009405, ECO:0000269|PubMed:8902625};
UniProt sequence OFOB_SACSO: RecName: Full=2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000303|PubMed:16466637}; Short=OFOR {ECO:0000305}; EC=1.2.7.11 {ECO:0000269|PubMed:16466637};
UniProt sequence OFOB2_SULTO: RecName: Full=2-oxoacid:ferredoxin oxidoreductase 2, subunit beta {ECO:0000303|PubMed:27619895}; Short=OFOR2 {ECO:0000303|PubMed:27619895}; EC=1.2.7.11 {ECO:0000269|PubMed:27619895};
UniProt sequence OFOB1_AERPE: RecName: Full=2-oxoacid:ferredoxin oxidoreductase 1, subunit beta {ECO:0000303|PubMed:15848165}; Short=OFOR1 {ECO:0000303|PubMed:15848165}; EC=1.2.7.11 {ECO:0000269|PubMed:15848165};
UniProt sequence OFOB2_AERPE: RecName: Full=2-oxoacid:ferredoxin oxidoreductase 2, subunit beta {ECO:0000303|PubMed:15848165}; Short=OFOR2 {ECO:0000303|PubMed:15848165}; EC=1.2.7.11 {ECO:0000269|PubMed:15848165};

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 304-318 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

OFOB1_AERPE 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta {ECO:0000303|PubMed:15848165}; Short=OFOR1 {ECO:0000303|PubMed:15848165}; EC=1.2.7.11 {ECO:0000269|PubMed:15848165}
318 amino acids: PaperBLAST, CDD, Compare to cluster

OFOB1_SULTO 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta {ECO:0000303|PubMed:27619895}; Short=OFOR1 {ECO:0000303|PubMed:27619895}; EC=1.2.7.11 {ECO:0000269|PubMed:27619895, ECO:0000305|PubMed:19027887}
305 amino acids: PaperBLAST, CDD, Compare to cluster

OFOB2_AERPE 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta {ECO:0000303|PubMed:15848165}; Short=OFOR2 {ECO:0000303|PubMed:15848165}; EC=1.2.7.11 {ECO:0000269|PubMed:15848165}
309 amino acids: PaperBLAST, CDD, Compare to cluster

OFOB2_SULTO 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta {ECO:0000303|PubMed:27619895}; Short=OFOR2 {ECO:0000303|PubMed:27619895}; EC=1.2.7.11 {ECO:0000269|PubMed:27619895}
304 amino acids: PaperBLAST, CDD, Compare to cluster

OFOB_SACSO 2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000303|PubMed:16466637}; Short=OFOR; EC=1.2.7.11 {ECO:0000269|PubMed:16466637}
305 amino acids: PaperBLAST, CDD, Compare to cluster

OFOB_SULSP 2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000303|PubMed:8902625}; Short=OFOR {ECO:0000303|PubMed:11683888}; EC=1.2.7.11 {ECO:0000269|PubMed:11683888, ECO:0000269|PubMed:12009405, ECO:0000269|PubMed:8902625}
305 amino acids: PaperBLAST, CDD, Compare to cluster