GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for leuB (3-isopropylmalate dehydrogenase) in L-leucine biosynthesis

Or see other characterized proteins similar to leuB

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Definition of leuB

Fetched 43 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 42 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 324-409 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

D2YZL2 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
364 amino acids: PaperBLAST, CDD, Compare to cluster

O60027 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
372 amino acids: PaperBLAST, CDD, Compare to cluster

O94114 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

P07139 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

P08791 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
363 amino acids: PaperBLAST, CDD, Compare to cluster

P24015 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
358 amino acids: PaperBLAST, CDD, Compare to cluster

P24098 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
344 amino acids: PaperBLAST, CDD, Compare to cluster

P24404 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
370 amino acids: PaperBLAST, CDD, Compare to cluster

P29102 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
406 amino acids: PaperBLAST, CDD, Compare to cluster

3-ISOPROPYLMALDEHYDROG-MONOMER 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
P30125 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
P30125 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
363 amino acids: PaperBLAST, CDD, Compare to cluster

P31958 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
357 amino acids: PaperBLAST, CDD, Compare to cluster

P34733 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
362 amino acids: PaperBLAST, CDD, Compare to cluster

P37412 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
P37412 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
363 amino acids: PaperBLAST, CDD, Compare to cluster

P50455 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85
P50455 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
337 amino acids: PaperBLAST, CDD, Compare to cluster

P54354 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
353 amino acids: PaperBLAST, CDD, Compare to cluster

P61494 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
345 amino acids: PaperBLAST, CDD, Compare to cluster

P61495 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
345 amino acids: PaperBLAST, CDD, Compare to cluster

G6986-MONOMER D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93)
P76251 D-malate dehydrogenase [decarboxylating]; D-malate degradation protein A; D-malate oxidase; EC 1.1.1.83
P76251 D-malate dehydrogenase (decarboxylating) (EC 1.1.1.83)
G6986-MONOMER D-malate / 3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.93)
CH_008421 D-malate dehydrogenase [decarboxylating]
PFams: Iso_dh
361 amino acids: PaperBLAST, CDD, Compare to cluster

P87256 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
363 amino acids: PaperBLAST, CDD, Compare to cluster

P93832 3-isopropylmalate dehydrogenase 2, chloroplastic; 3-IPM-DH 2; AtIMDH2; AtIMDH3; IMDH 2; Beta-IPM dehydrogenase 2; Isopropylmalate dehydrogenase 2; AtIMD2; EC 1.1.1.85
P93832 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
405 amino acids: PaperBLAST, CDD, Compare to cluster

P94929 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
336 amino acids: PaperBLAST, CDD, Compare to cluster

P96197 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh, Iso_dh
360 amino acids: PaperBLAST, CDD, Compare to cluster

Q00412 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
355 amino acids: PaperBLAST, CDD, Compare to cluster

Q01987 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
365 amino acids: PaperBLAST, CDD, Compare to cluster

Q4JB37 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
337 amino acids: PaperBLAST, CDD, Compare to cluster

Q56268 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
Q56268 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
358 amino acids: PaperBLAST, CDD, Compare to cluster

Q5SIJ1 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87
Q72IW9 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87
Q5SIJ1 homoisocitrate dehydrogenase (EC 1.1.1.87)
Q72IW9 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286); 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
334 amino acids: PaperBLAST, CDD, Compare to cluster

Q5SIY4 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
Q5SIY4 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
345 amino acids: PaperBLAST, CDD, Compare to cluster

Q6PY58 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
363 amino acids: PaperBLAST, CDD, Compare to cluster

Q8E9N3 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
364 amino acids: PaperBLAST, CDD, Compare to cluster

Q9FMT1 3-isopropylmalate dehydrogenase 1, chloroplastic; 3-IPM-DH 1; AtIMDH1; IMDH 1; Beta-IPM dehydrogenase 1; Isopropylmalate dehydrogenase 1; AtIMD1; Methylthioalkylmalate dehydrogenase 1; EC 1.1.1.85
Q9FMT1 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
AT5G14200-MONOMER isopropylmalate dehydrogenase 3 (EC 1.1.1.85)
PFams: Iso_dh
409 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SA14 3-isopropylmalate dehydrogenase 3, chloroplastic; 3-IPM-DH 3; AtIMDH2; AtIMDH3; IMDH 3; Beta-IPM dehydrogenase 3; Isopropylmalate dehydrogenase 3; AtIMD3; EC 1.1.1.85
Q9SA14 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
404 amino acids: PaperBLAST, CDD, Compare to cluster

Q9Y897 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
365 amino acids: PaperBLAST, CDD, Compare to cluster

CH_122857 3-isopropylmalate dehydrogenase; EC 1.1.1.85
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

CH_125168 3-isopropylmalate dehydrogenase Leu1; EC 1.1.1.85
PFams: Iso_dh
371 amino acids: PaperBLAST, CDD, Compare to cluster

C9K7B7 3-isopropylmalate dehydrogenase AMT6; AM-toxin biosynthesis protein 6; EC 1.1.1.85
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

D4GYE8 3-isopropylmalate dehydrogenase; EC 1.1.1.85
PFams: Iso_dh
324 amino acids: PaperBLAST, CDD, Compare to cluster

K0E689 Isopropyl malate dehydrogenase htyC; L-homotyrosine biosynthetic cluster protein C; EC 1.1.1.85
PFams: Iso_dh
366 amino acids: PaperBLAST, CDD, Compare to cluster

P12010 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
PFams: Iso_dh
366 amino acids: PaperBLAST, CDD, Compare to cluster

P9WKK9 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85
PFams: Iso_dh
336 amino acids: PaperBLAST, CDD, Compare to cluster

Q58130 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83
PFams: Iso_dh
333 amino acids: PaperBLAST, CDD, Compare to cluster

S3DB74 3-isopropylmalate dehydrogenase gloI; L-homotyrosine biosynthesis sub-cluster protein gloI; Pneumocandin biosynthesis cluster protein I; EC 1.1.1.85
PFams: Iso_dh
373 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

P87267 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
123 amino acids: PaperBLAST, CDD